Ultrafast Photochemical Reaction of Exiguobacterium sibiricum Rhodopsin (ESR) at Alkaline pH

Rhodopsin from the eubacterium Exiguobacterium sibiricum (ESR) performs the function of light-dependent proton transport. The operation of ESR is based on the ultrafast photochemical reaction of isomerization of the retinal chromophore, which triggers dark processes closed in the photocycle. Many parameters of the photocycle are determined by the degree of protonation of Asp85 – the primary counterion of the chromophore group and the proton acceptor. ESR in detergent micelles pumps protons most efficiently at pH 9, when Asp85 is almost completely deprotonated. In this work, the photochemical reaction of ESR at pH 9.5 was studied by femtosecond laser absorption spectroscopy. It was shown that photoisomerization of the chromophore group occurs in 0.51 ps, and the contribution of the reactive excited state is about 80%. A comparison with the data we obtained at pH 7.4 showed that at pH 9.5 the reaction proceeds much faster and more efficiently. The data obtained confirm the important role of the chromophore group counterion in the photoactivated processes of rhodopsins.

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Publication Details

Journal
Биоорганическая химия
Published
2024-10-25
DOI
https://doi.org/10.31857/s0132342324040107
Primary Topic
Photoreceptor and optogenetics research
Type
article
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article

Ultrafast Photochemical Reaction of Exiguobacterium sibiricum Rhodopsin (ESR) at Alkaline pH

Dmitry A. Cherepanov, Д. А. Долгих, T. B. Feldman, М. А. Оstrovsky et al.
Биоорганическая химия
Photoreceptor and optogenetics research
article

Ultrafast Photochemical Reaction of Exiguobacterium sibiricum Rhodopsin (ESR) at Alkaline pH

Dmitry A. Cherepanov, Д. А. Долгих, T. B. Feldman, М. А. Оstrovsky, L. E. Petrovskaya, I. B. Kolchugina, М. П. Кирпичников, В. А. Надточенко, O. A. Smitienko, I. V. Shelaev, E. A. Kryukova, F. E. Gostev
article en

Abstract

Rhodopsin from the eubacterium Exiguobacterium sibiricum (ESR) performs the function of light-dependent proton transport. The operation of ESR is based on the ultrafast photochemical reaction of isomerization of the retinal chromophore, which triggers dark processes closed in the photocycle. Many parameters of the photocycle are determined by the degree of protonation of Asp85 – the primary counterion of the chromophore group and the proton acceptor. ESR in detergent micelles pumps protons most efficiently at pH 9, when Asp85 is almost completely deprotonated. In this work, the photochemical reaction of ESR at pH 9.5 was studied by femtosecond laser absorption spectroscopy. It was shown that photoisomerization of the chromophore group occurs in 0.51 ps, and the contribution of the reactive excited state is about 80%. A comparison with the data we obtained at pH 7.4 showed that at pH 9.5 the reaction proceeds much faster and more efficiently. The data obtained confirm the important role of the chromophore group counterion in the photoactivated processes of rhodopsins.

Биоорганическая химияVol. 50(4)
Lomonosov Moscow State University (RU), Semenov Institute of Chemical Physics (RU), Institute of Bioorganic Chemistry (BY), Institute of Biochemical Physics NM Emanuel (RU), Moscow State University (TJ)
Openalex Percentile: Top 80%
Photoreceptor and optogenetics research
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Ultrafast Photochemical Reaction of Exiguobacterium sibiricum Rhodopsin (ESR) at Alkaline pH — Dmitry A. Cherepanov, Д. А. Долгих, et al. · Биоорганическая химия (2024) | TGRS Research Map | TGRS