Identification of exosomal ceRNA networks as prognostic markers in clear cell renal cell carcinoma

Aggressive clear cell renal cell carcinoma (ccRCC) has a bad prognosis. We seek new ccRCC biomarkers for diagnosis and treatment. We used exoRBase and The Cancer Genome Atlas Database to compare DEmRNAs, DEmiRNAs, DElncRNAs, and DEcircRNAs in ccRCC and normal renal tissues. CircRNAs and circRNAs targeting microRNAs (miRNAs) were anticipated and taken intersections, and several databases assessed the targeted link between common miRNAs and messenger RNAs (mRNAs). The Cancer Genome Atlas database was used to create a predictive mRNA signature that was validated in E-MTAB-1980. Finally, we examined competing endogenous RNA network miRNAs and long noncoding RNAs for ccRCC predictive biomarkers using overall survival analysis. We built the first competing endogenous RNA regulation network of circRNA-lncRNA-miRNA-mRNA and found that it substantially correlates with ccRCC prognosis. We unveiled ccRCC's posttranscriptional regulation mechanism in greater detail. Our findings identified novel biomarkers for ccRCC diagnosis, therapy, and prognosis.

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Publication Details

Journal
Medicine
Published
2024-10-25
DOI
https://doi.org/10.1097/md.0000000000040167
Citations
2
Primary Topic
Circular RNAs in diseases
Type
article
Field-Weighted Citation Impact
0.47

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article

Identification of exosomal ceRNA networks as prognostic markers in clear cell renal cell carcinoma

Haian Fu, Tao Zhu, Shidong Zhang, Shanchun Guo et al.
2 citations
Medicine
Circular RNAs in diseases
0.47
article

Identification of exosomal ceRNA networks as prognostic markers in clear cell renal cell carcinoma

Haian Fu, Tao Zhu, Shidong Zhang, Shanchun Guo, Zhiqiang Wang
article en
2 citations

Abstract

Aggressive clear cell renal cell carcinoma (ccRCC) has a bad prognosis. We seek new ccRCC biomarkers for diagnosis and treatment. We used exoRBase and The Cancer Genome Atlas Database to compare DEmRNAs, DEmiRNAs, DElncRNAs, and DEcircRNAs in ccRCC and normal renal tissues. CircRNAs and circRNAs targeting microRNAs (miRNAs) were anticipated and taken intersections, and several databases assessed the targeted link between common miRNAs and messenger RNAs (mRNAs). The Cancer Genome Atlas database was used to create a predictive mRNA signature that was validated in E-MTAB-1980. Finally, we examined competing endogenous RNA network miRNAs and long noncoding RNAs for ccRCC predictive biomarkers using overall survival analysis. We built the first competing endogenous RNA regulation network of circRNA-lncRNA-miRNA-mRNA and found that it substantially correlates with ccRCC prognosis. We unveiled ccRCC's posttranscriptional regulation mechanism in greater detail. Our findings identified novel biomarkers for ccRCC diagnosis, therapy, and prognosis.

MedicineVol. 103(43)
Xavier University of Louisiana (US), Weifang People's Hospital (CN), Shougang (China) (CN)
National Institutes of Health, National Institute of General Medical Sciences
Good health and well-being
Openalex Percentile: Top 34%
Circular RNAs in diseases
0.47
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Identification of exosomal ceRNA networks as prognostic markers in clear cell renal cell carcinoma — Haian Fu, Tao Zhu, et al. · Medicine (2024) | TGRS Research Map | TGRS