Practical Screening Method for Cancer Gene Diagnosis -How to Choose Cancer and Normal Patients by four Principles

We developed a new theory of discriminant analysis (Theory1). Physicians can use it for practical medical diagnoses. Only Revised IP Optimal-LDF (RIP) obtains the minimum number of misclassification (MNM). RIP can discriminate linearly separable data (LSD) theoretically. It discriminated against 169 microarrays with two classes and found that 169 MNMs are zero and LSD. It can split high-dimensional arrays into many small LSD with less than n (patient’s number) genes that are the candidates of multivariate oncogenes. We completed a new theory of high-dimensional gene data analysis (Theory2). A 100-fold Cross-Validation (Method1) can rank all candidates for the importance of diagnosis. Thus, if physicians firstly use Theory2 as the screening method, they can start their medical studies with the correct small sizes of candidates. This paper analyzes four arrays in detail and proposes correctly choosing cancer and normal patients using four principles.

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Publication Details

Journal
Global Journal of Computer Science and Technology
Published
2024-10-28
DOI
https://doi.org/10.34257/ljrcstvol24is2pg1
Primary Topic
Nutrition, Genetics, and Disease
Type
article
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article

Practical Screening Method for Cancer Gene Diagnosis -How to Choose Cancer and Normal Patients by four Principles

Shuichi Shinmura
Global Journal of Computer Science and Technology
Nutrition, Genetics, and Disease
article

Practical Screening Method for Cancer Gene Diagnosis -How to Choose Cancer and Normal Patients by four Principles

Shuichi Shinmura
article en

Abstract

We developed a new theory of discriminant analysis (Theory1). Physicians can use it for practical medical diagnoses. Only Revised IP Optimal-LDF (RIP) obtains the minimum number of misclassification (MNM). RIP can discriminate linearly separable data (LSD) theoretically. It discriminated against 169 microarrays with two classes and found that 169 MNMs are zero and LSD. It can split high-dimensional arrays into many small LSD with less than n (patient’s number) genes that are the candidates of multivariate oncogenes. We completed a new theory of high-dimensional gene data analysis (Theory2). A 100-fold Cross-Validation (Method1) can rank all candidates for the importance of diagnosis. Thus, if physicians firstly use Theory2 as the screening method, they can start their medical studies with the correct small sizes of candidates. This paper analyzes four arrays in detail and proposes correctly choosing cancer and normal patients using four principles.

Global Journal of Computer Science and Technology
Reduced inequalities
Openalex Percentile: Top 78%
Nutrition, Genetics, and Disease
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Practical Screening Method for Cancer Gene Diagnosis -How to Choose Cancer and Normal Patients by four Principles — Shuichi Shinmura · Global Journal of Computer Science and Technology (2024) | TGRS Research Map | TGRS