Radiomics-Based Machine Learning with Natural Gradient Boosting for Continuous Survival Prediction in Glioblastoma

(1) Background: Glioblastoma (GBM) is the most common primary malignant brain tumor in adults, with an aggressive disease course that requires accurate prognosis for individualized treatment planning. This study aims to develop and evaluate a radiomics-based machine learning (ML) model to estimate overall survival (OS) for patients with GBM using pre-treatment multi-parametric magnetic resonance imaging (MRI). (2) Methods: The MRI data of 865 patients with GBM were assessed, comprising 499 patients from the UPENN-GBM dataset and 366 patients from the UCSF-PDGM dataset. A total of 14,598 radiomic features were extracted from T1, T1 with contrast, T2, and FLAIR MRI sequences using PyRadiomics. The UPENN-GBM dataset was used for model development (70%) and internal validation (30%), while the UCSF-PDGM dataset served as an external test set. The NGBoost Survival model was developed to generate continuous probability estimates as well as predictions for 6-, 12-, 18-, and 24-month OS. (3) Results: The NGBoost Survival model successfully predicted survival, achieving a C-index of 0.801 on internal validation and 0.725 on external validation. For 6-month OS, the model attained an AUROC of 0.791 (95% CI: 0.742-0.832) and 0.708 (95% CI: 0.654-0.748) for internal and external validation, respectively. (4) Conclusions: The radiomics-based ML model demonstrates potential to improve the prediction of OS for patients with GBM.

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Publication Details

Journal
Cancers
Published
2024-10-26
DOI
https://doi.org/10.3390/cancers16213614
Citations
13
Primary Topic
Radiomics and Machine Learning in Medical Imaging
Type
article
Field-Weighted Citation Impact
5.26
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article

Radiomics-Based Machine Learning with Natural Gradient Boosting for Continuous Survival Prediction in Glioblastoma

Zachary Charles Gersey, Konstantinos D. Margetis, Mert Karabacak, Shiv Patil et al.
13 citations
Cancers
Radiomics and Machine Learning in Medical Imaging
5.26
article

Radiomics-Based Machine Learning with Natural Gradient Boosting for Continuous Survival Prediction in Glioblastoma

Zachary Charles Gersey, Konstantinos D. Margetis, Mert Karabacak, Shiv Patil, Ricardo J. Komotar
article en
13 citations

Abstract

(1) Background: Glioblastoma (GBM) is the most common primary malignant brain tumor in adults, with an aggressive disease course that requires accurate prognosis for individualized treatment planning. This study aims to develop and evaluate a radiomics-based machine learning (ML) model to estimate overall survival (OS) for patients with GBM using pre-treatment multi-parametric magnetic resonance imaging (MRI). (2) Methods: The MRI data of 865 patients with GBM were assessed, comprising 499 patients from the UPENN-GBM dataset and 366 patients from the UCSF-PDGM dataset. A total of 14,598 radiomic features were extracted from T1, T1 with contrast, T2, and FLAIR MRI sequences using PyRadiomics. The UPENN-GBM dataset was used for model development (70%) and internal validation (30%), while the UCSF-PDGM dataset served as an external test set. The NGBoost Survival model was developed to generate continuous probability estimates as well as predictions for 6-, 12-, 18-, and 24-month OS. (3) Results: The NGBoost Survival model successfully predicted survival, achieving a C-index of 0.801 on internal validation and 0.725 on external validation. For 6-month OS, the model attained an AUROC of 0.791 (95% CI: 0.742-0.832) and 0.708 (95% CI: 0.654-0.748) for internal and external validation, respectively. (4) Conclusions: The radiomics-based ML model demonstrates potential to improve the prediction of OS for patients with GBM.

CancersVol. 16(21)
Mount Sinai Health System (US), University of Miami (US), Thomas Jefferson University (US), Neurological Surgery (US)
Good health and well-being
Openalex Percentile: Top 4%
Radiomics and Machine Learning in Medical Imaging
5.26
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Radiomics-Based Machine Learning with Natural Gradient Boosting for Continuous Survival Prediction in Glioblastoma — Zachary Charles Gersey, Konstantinos D. Margetis, et al. · Cancers (2024) | TGRS Research Map | TGRS