Mechanism-based Modelling for Fitting the Double-exponential Progress Curves of Cellulase Reaction

Enzymatic hydrolysis of cellulosic biomass is a complex process involving many factors, including multiple enzymes, heterogeneous substrates, and multi-step enzyme reactions. Cellulase researchers have conventionally used a double-exponential equation to fit the experimental time course of product formation, but no theoretical basis for this has been established. Here we present a mechanism-based equation that fits well the progress curves of cellulase reaction, incorporating the concepts of non-productive and productive binding on the cellulose surface and processivity. The derived equation is double exponential. Our findings indicate that the reaction mechanism of cellulase itself can account for the double-exponential nature of the progress curve independently of other factors that may contribute, such as substrate heterogeneity and involvement of other enzymes.

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Publication Details

Journal
Journal of Applied Glycoscience
Published
2024-10-28
DOI
https://doi.org/10.5458/jag.jag.jag-2024_0007
Citations
1
Primary Topic
Biofuel production and bioconversion
Type
article
Field-Weighted Citation Impact
0.18

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article

Mechanism-based Modelling for Fitting the Double-exponential Progress Curves of Cellulase Reaction

Masahiro Samejima, Kiyohiko Igarashi, Takahiro Ezaki
1 citations
Journal of Applied Glycoscience
Biofuel production and bioconversion
0.18
article

Mechanism-based Modelling for Fitting the Double-exponential Progress Curves of Cellulase Reaction

Masahiro Samejima, Kiyohiko Igarashi, Takahiro Ezaki
article en
1 citations

Abstract

Enzymatic hydrolysis of cellulosic biomass is a complex process involving many factors, including multiple enzymes, heterogeneous substrates, and multi-step enzyme reactions. Cellulase researchers have conventionally used a double-exponential equation to fit the experimental time course of product formation, but no theoretical basis for this has been established. Here we present a mechanism-based equation that fits well the progress curves of cellulase reaction, incorporating the concepts of non-productive and productive binding on the cellulose surface and processivity. The derived equation is double exponential. Our findings indicate that the reaction mechanism of cellulase itself can account for the double-exponential nature of the progress curve independently of other factors that may contribute, such as substrate heterogeneity and involvement of other enzymes.

Journal of Applied GlycoscienceVol. 71(4)
The University of Tokyo (JP)
Environmental Restoration and Conservation Agency, Ministry of Education, Culture, Sports, Science and Technology, Japan Society for the Promotion of Science
Openalex Percentile: Top 51%
Biofuel production and bioconversion
0.18
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Mechanism-based Modelling for Fitting the Double-exponential Progress Curves of Cellulase Reaction — Masahiro Samejima, Kiyohiko Igarashi, et al. · Journal of Applied Glycoscience (2024) | TGRS Research Map | TGRS