PathUp: Patch-wise Timestep Tracking for Multi-class Large Pathology Image Synthesising Diffusion Model

In digital pathology, cancer lesions are identified by analyzing the spatial context within pathology images. Synthesizing such complex spatial context is challenging as pathology whole slide images typically exhibit high resolution, low inter-class variety, and are sparsely labeled. To address these challenges, we propose PathUp, a novel diffusion model tailored for the synthesis of multi-class high-resolution pathology images. Our approach includes a latent space patch-wise timestep tracking, which helps to generate high-quality images without tiling artifacts. Pathology knowledge is integrated through our patho-align. The robust generation of lesion subtypes and scale information is ensured by introducing a feature entropy loss. The effectiveness of our method is evaluated through extensive experiments, supplemented by assessments from human experts, demonstrating the authenticity of the synthetic data produced. Furthermore, we highlight the potential utility of our generated images as an augmentation method, thereby enhancing the performance of downstream tasks such as cancer subtype classification.

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Publication Details

Published
2024-10-26
DOI
https://doi.org/10.1145/3664647.3681295
Citations
2
Primary Topic
AI in cancer detection
Type
article
Field-Weighted Citation Impact
0.69
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article

PathUp: Patch-wise Timestep Tracking for Multi-class Large Pathology Image Synthesising Diffusion Model

Yunlong Zhang, Pingyi Chen, Chenglu Zhu, Jingxiong Li et al.
2 citations
AI in cancer detection
0.69
article

PathUp: Patch-wise Timestep Tracking for Multi-class Large Pathology Image Synthesising Diffusion Model

Yunlong Zhang, Pingyi Chen, Chenglu Zhu, Jingxiong Li, Zhongyi Shui, Sunyi Zheng, Lin Yang, Yuxuan Sun, Honglin Li
article en
2 citations

Abstract

In digital pathology, cancer lesions are identified by analyzing the spatial context within pathology images. Synthesizing such complex spatial context is challenging as pathology whole slide images typically exhibit high resolution, low inter-class variety, and are sparsely labeled. To address these challenges, we propose PathUp, a novel diffusion model tailored for the synthesis of multi-class high-resolution pathology images. Our approach includes a latent space patch-wise timestep tracking, which helps to generate high-quality images without tiling artifacts. Pathology knowledge is integrated through our patho-align. The robust generation of lesion subtypes and scale information is ensured by introducing a feature entropy loss. The effectiveness of our method is evaluated through extensive experiments, supplemented by assessments from human experts, demonstrating the authenticity of the synthetic data produced. Furthermore, we highlight the potential utility of our generated images as an augmentation method, thereby enhancing the performance of downstream tasks such as cancer subtype classification.

Westlake University (CN), Zhejiang University (CN)
Openalex Percentile: Top 24%
AI in cancer detection
0.69
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PathUp: Patch-wise Timestep Tracking for Multi-class Large Pathology Image Synthesising Diffusion Model — Yunlong Zhang, Pingyi Chen, et al. · (2024) | TGRS Research Map | TGRS