Application of Machine Learning in the Development of Fourth Degree Quantitative Structure–Activity Relationship Model for Triclosan Analogs Tested against <i>Plasmodium falciparum</i> 3D7

Despite new therapies against malaria, this disease remains one of the main causes of death affecting humanity. The phenomenon of resistance has caused concern as the drugs no longer have the same efficacy, forcing scientific research to develop new methods that prospect new molecules. With the advancement of artificial intelligence, it becomes possible to apply machine learning (ML) techniques in the discovery and evaluation of new molecules, by employing the quantitative structure-activity relationship (QSAR), a classic method that uses regressions to create a model that allows identifying and evaluating new drug candidates. This work combined QSAR with ML and developed a supervised model that modeled a fourth degree polynomial equation capable of identifying new drug candidates derived from the triclosan compound-a classic inhibitor of <i>Plasmodium falciparum</i> growth, the cause of severe malaria. The model produces an <i>R</i> <sup>2</sup> greater than 80% for training and concurrent testing, as well as a correlation index greater than 80% between the calculated and experimental pEC<sub>50</sub> (negative logarithm of half maximal effective concentration) data. In addition, a web software (PlasmoQSAR) was created that allows researchers to calculate the EC<sub>50</sub> (half maximal effective concentration) of new molecules using the developed analytical method.

Authors

Institutions

Publication Details

Journal
ACS Omega
Published
2024-10-25
DOI
https://doi.org/10.1021/acsomega.4c05768
Primary Topic
Computational Drug Discovery Methods
Type
article
Field-Weighted Citation Impact
0.00

Funders

Controls
|||
ALL TIME
JAN
FEB
MAR
APR
MAY
JUN
JUL
AUG
SEP
OCT
article

Application of Machine Learning in the Development of Fourth Degree Quantitative Structure–Activity Relationship Model for Triclosan Analogs Tested against Plasmodium falciparum 3D7

Fernando Berton Zanchi, Ivo Henrique Provensi Vieira, Fabrício Berton Zanchi, Rafael Andrade Caceres et al.
ACS Omega
Computational Drug Discovery Methods
article

Application of Machine Learning in the Development of Fourth Degree Quantitative Structure–Activity Relationship Model for Triclosan Analogs Tested against Plasmodium falciparum 3D7

Fernando Berton Zanchi, Ivo Henrique Provensi Vieira, Fabrício Berton Zanchi, Rafael Andrade Caceres, Railton Marques de Souza Guimarães
article en

Abstract

Despite new therapies against malaria, this disease remains one of the main causes of death affecting humanity. The phenomenon of resistance has caused concern as the drugs no longer have the same efficacy, forcing scientific research to develop new methods that prospect new molecules. With the advancement of artificial intelligence, it becomes possible to apply machine learning (ML) techniques in the discovery and evaluation of new molecules, by employing the quantitative structure-activity relationship (QSAR), a classic method that uses regressions to create a model that allows identifying and evaluating new drug candidates. This work combined QSAR with ML and developed a supervised model that modeled a fourth degree polynomial equation capable of identifying new drug candidates derived from the triclosan compound-a classic inhibitor of <i>Plasmodium falciparum</i> growth, the cause of severe malaria. The model produces an <i>R</i> <sup>2</sup> greater than 80% for training and concurrent testing, as well as a correlation index greater than 80% between the calculated and experimental pEC<sub>50</sub> (negative logarithm of half maximal effective concentration) data. In addition, a web software (PlasmoQSAR) was created that allows researchers to calculate the EC<sub>50</sub> (half maximal effective concentration) of new molecules using the developed analytical method.

ACS OmegaVol. 9(44)
Universidade Federal de Rondônia (BR), Universidade Federal de Ciências da Saúde de Porto Alegre (BR), Universidade Federal do Sul da Bahia (BR), Centro Nacional de Epidemiología (ES), Centro Universitário Capital (BR), Faculdades Guarulhos (BR), Bioinformatics Institute (RU), Institute of Bioinformatics (IN), National Education and Research Network (BR), Fundação Oswaldo Cruz (BR)
Coordenação de Aperfeiçoamento de Pessoal de Nível Superior, Conselho Nacional de Desenvolvimento Científico e Tecnológico
Openalex Percentile: Top 77%
Computational Drug Discovery Methods
AI Navigator

Ask Laika to Summarize, Analyze, and Connect papers live on the map.

Summarize Papers & Methodologies

Extract key findings, datasets, and comparative methods across publications.

Benchmark Rankings & Visual Analytics

Rank top research institutions, authors, funders, topics, and journals by Field-Weighted Citation Impact (FWCI) and paper volume with instant charts.

Connect Distant Disciplines

Bridge topological clusters on the map to find hidden collaborative intersections.