The complete chloroplast genome of <i>Erodium cicutarium</i> (Linnaeus) l’ Héritier ex Aiton 1789 (Geraniaceae): genome characterization and phylogenetic consideration

<i>Erodium cicutarium</i> is an annual herbaceous plant valued for its applications in traditional medicine. However, the chloroplast genome of <i>E. cicutarium</i> has yet to be reported. In this study, we assembled chloroplast genomes of <i>Erodium cicutarium</i> using Illumina sequencing reads. The chloroplast genome was 114,652 bp long, harbored 111 complete genes, and its overall GC content was 39.1%. In Maximum Likelihood (ML) and Bayesian inference (BI) trees, the 13 <i>Erodium</i> species divided into three main clades, with <i>E. cicutarium</i> and <i>E. carvifolium</i> forming a monophyletic group, suggesting a close relationship between the two species. The <i>E. cicutarium</i> cp genome presented in this study lays a good foundation for the <i>Erodium</i>.

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Publication Details

Journal
Mitochondrial DNA Part B
Published
2024-10-02
DOI
https://doi.org/10.1080/23802359.2024.2420847
Primary Topic
Genomics and Phylogenetic Studies
Type
article
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article

The complete chloroplast genome of Erodium cicutarium (Linnaeus) l’ Héritier ex Aiton 1789 (Geraniaceae): genome characterization and phylogenetic consideration

Shengwei Chen, Jiawen Cui, Yujie Wu, Ting Guo et al.
Mitochondrial DNA Part B
Genomics and Phylogenetic Studies
article

The complete chloroplast genome of Erodium cicutarium (Linnaeus) l’ Héritier ex Aiton 1789 (Geraniaceae): genome characterization and phylogenetic consideration

Shengwei Chen, Jiawen Cui, Yujie Wu, Ting Guo, Lei Zhang
article en

Abstract

<i>Erodium cicutarium</i> is an annual herbaceous plant valued for its applications in traditional medicine. However, the chloroplast genome of <i>E. cicutarium</i> has yet to be reported. In this study, we assembled chloroplast genomes of <i>Erodium cicutarium</i> using Illumina sequencing reads. The chloroplast genome was 114,652 bp long, harbored 111 complete genes, and its overall GC content was 39.1%. In Maximum Likelihood (ML) and Bayesian inference (BI) trees, the 13 <i>Erodium</i> species divided into three main clades, with <i>E. cicutarium</i> and <i>E. carvifolium</i> forming a monophyletic group, suggesting a close relationship between the two species. The <i>E. cicutarium</i> cp genome presented in this study lays a good foundation for the <i>Erodium</i>.

Mitochondrial DNA Part BVol. 9(10)
State Ethnic Affairs Commission (CN), North Minzu University (CN)
Openalex Percentile: Top 83%
Genomics and Phylogenetic Studies
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The complete chloroplast genome of <i>Erodium cicutarium</i> (Linnaeus) l’ Héritier ex Aiton 1789 (Geraniaceae): genome characterization and phylogenetic consideration — Shengwei Chen, Jiawen Cui, et al. · Mitochondrial DNA Part B (2024) | TGRS Research Map | TGRS