<i>TreeCompR</i> : Tree competition indices for inventory data and 3D point clouds

Abstract In times of more frequent global change‐type droughts and associated tree mortality events, competition release is one silvicultural measure discussed to have an impact on the resilience of managed forest stands. Understanding how trees compete with each other is therefore crucial, but different measurement options and competition indices (CI) leave users with a difficult choice, as no single competition index has proven universally superior. To help users with the choice and computation of appropriate indices, we present the open‐source TreeCompR package, which handles 3D point clouds and classical forest inventory data, enabling the calculation of both innovative point cloud‐based indices and traditional distance‐dependent indices. It serves as a centralized platform for exploring and comparing different CIs, allowing users to test and select the most suitable CI for their specific research questions within a common interface. To evaluate the package, we used TreeCompR to quantify the competition situation of 307 European beech trees from 13 sites in Central Europe. Based on this dataset, we discuss the interpretation, comparability and sensitivity of the different indices to their parameterization and identify possible sources of uncertainty and ways to minimize them. The compatibility of TreeCompR with different data formats and different data collection methods makes it accessible and useful for a wide range of users, specifically ecologists and foresters. Due to the flexibility in the choice of input formats as well as the emphasis on tidy, well‐structured output, our package can easily be integrated into existing data‐analysis workflows both for 3D point cloud and classical forest inventory data.

Authors

Institutions

Publication Details

Journal
Methods in Ecology and Evolution
Published
2024-10-23
DOI
https://doi.org/10.1111/2041-210x.14414
Citations
6
Primary Topic
Remote Sensing and LiDAR Applications
Type
article
Field-Weighted Citation Impact
1.23

Funders

Controls
|||
ALL TIME
JAN
FEB
MAR
APR
MAY
JUN
JUL
AUG
SEP
OCT
article

TreeCompR : Tree competition indices for inventory data and 3D point clouds

Roman M. Link, Bernhard Schuldt, Dominik Seidel, Anja Žmegač et al.
6 citations
Methods in Ecology and Evolution
Remote Sensing and LiDAR Applications
1.23
article

TreeCompR : Tree competition indices for inventory data and 3D point clouds

Roman M. Link, Bernhard Schuldt, Dominik Seidel, Anja Žmegač, Tobias Ullmann, Christian Zang, Julia S. Rieder, Konstantin Köthe
article en
6 citations

Abstract

Abstract In times of more frequent global change‐type droughts and associated tree mortality events, competition release is one silvicultural measure discussed to have an impact on the resilience of managed forest stands. Understanding how trees compete with each other is therefore crucial, but different measurement options and competition indices (CI) leave users with a difficult choice, as no single competition index has proven universally superior. To help users with the choice and computation of appropriate indices, we present the open‐source TreeCompR package, which handles 3D point clouds and classical forest inventory data, enabling the calculation of both innovative point cloud‐based indices and traditional distance‐dependent indices. It serves as a centralized platform for exploring and comparing different CIs, allowing users to test and select the most suitable CI for their specific research questions within a common interface. To evaluate the package, we used TreeCompR to quantify the competition situation of 307 European beech trees from 13 sites in Central Europe. Based on this dataset, we discuss the interpretation, comparability and sensitivity of the different indices to their parameterization and identify possible sources of uncertainty and ways to minimize them. The compatibility of TreeCompR with different data formats and different data collection methods makes it accessible and useful for a wide range of users, specifically ecologists and foresters. Due to the flexibility in the choice of input formats as well as the emphasis on tidy, well‐structured output, our package can easily be integrated into existing data‐analysis workflows both for 3D point cloud and classical forest inventory data.

Methods in Ecology and EvolutionVol. 15(12)
University of Würzburg (DE), Weihenstephan-Triesdorf University of Applied Sciences (DE), Technical University of Munich (DE), University of Göttingen (DE)
Deutsche Forschungsgemeinschaft
Openalex Percentile: Top 23%
Remote Sensing and LiDAR Applications
1.23
AI Navigator

Ask Laika to Summarize, Analyze, and Connect papers live on the map.

Summarize Papers & Methodologies

Extract key findings, datasets, and comparative methods across publications.

Benchmark Rankings & Visual Analytics

Rank top research institutions, authors, funders, topics, and journals by Field-Weighted Citation Impact (FWCI) and paper volume with instant charts.

Connect Distant Disciplines

Bridge topological clusters on the map to find hidden collaborative intersections.