Genome Resource Announcement for Emerging Pathogen <i>Bipolaris gigantea</i> , Isolated from <i>Microstegium vimineum</i>

Bipolaris gigantea is a pathogen of the invasive grass Microstegium vimineum and is an emerging pathogen of other hosts such as hemp and barley, causing characteristic eyespot foliar lesions. The fungus is characterized by long pale hyaline conidia measuring approximately 300 to 350 μm. Previously, this pathogen was classified in the Drechslera genus; it was recently reassigned as Bipolaris based on molecular identification. Here, we generated a high-quality draft genome sequence of B. gigantea isolate BGF using long- and short-read DNA sequencing. The assembled genome, 30.23 Mb in size with a Benchmarking Universal Single-Copy Orthologs (BUSCO) completeness score of 98.4%, exhibited synteny with the common grass pathogen B. sorokiniana isolate 10943. Average nucleotide identity (ANI) and single nucleotide polymorphism (SNP) analyses revealed high sequence identity with B. gigantea isolates from Cannabis sativa fields in Kentucky. This research provides a genomic resource that will contribute to future studies to understand the host range evolution and pathogenicity of this novel pathogen. [Formula: see text] Copyright © 2025 The Author(s). This is an open access article distributed under the CC BY-NC-ND 4.0 International license .

Authors

Institutions

Publication Details

Journal
PhytoFrontiers™
Published
2024-10-23
DOI
https://doi.org/10.1094/phytofr-09-24-0094-a
Primary Topic
Plant Pathogens and Fungal Diseases
Type
article
Field-Weighted Citation Impact
0.00
Controls
|||
ALL TIME
JAN
FEB
MAR
APR
MAY
JUN
JUL
AUG
SEP
OCT
article

Genome Resource Announcement for Emerging Pathogen Bipolaris gigantea , Isolated from Microstegium vimineum

Ashish Adhikari, Brett Lane, James C. Fulton, Jeremy Brawner et al.
PhytoFrontiers™
Plant Pathogens and Fungal Diseases
article

Genome Resource Announcement for Emerging Pathogen Bipolaris gigantea , Isolated from Microstegium vimineum

Ashish Adhikari, Brett Lane, James C. Fulton, Jeremy Brawner, Erica M. Goss, Philip F. Harmon, Jeffrey A. Rollins
article en

Abstract

Bipolaris gigantea is a pathogen of the invasive grass Microstegium vimineum and is an emerging pathogen of other hosts such as hemp and barley, causing characteristic eyespot foliar lesions. The fungus is characterized by long pale hyaline conidia measuring approximately 300 to 350 μm. Previously, this pathogen was classified in the Drechslera genus; it was recently reassigned as Bipolaris based on molecular identification. Here, we generated a high-quality draft genome sequence of B. gigantea isolate BGF using long- and short-read DNA sequencing. The assembled genome, 30.23 Mb in size with a Benchmarking Universal Single-Copy Orthologs (BUSCO) completeness score of 98.4%, exhibited synteny with the common grass pathogen B. sorokiniana isolate 10943. Average nucleotide identity (ANI) and single nucleotide polymorphism (SNP) analyses revealed high sequence identity with B. gigantea isolates from Cannabis sativa fields in Kentucky. This research provides a genomic resource that will contribute to future studies to understand the host range evolution and pathogenicity of this novel pathogen. [Formula: see text] Copyright © 2025 The Author(s). This is an open access article distributed under the CC BY-NC-ND 4.0 International license .

PhytoFrontiers™Vol. 5(1)
University of Minnesota (US), Florida Department of Agriculture and Consumer Services (US), University of Florida (US)
Openalex Percentile: Top 81%
Plant Pathogens and Fungal Diseases
AI Navigator

Ask Laika to Summarize, Analyze, and Connect papers live on the map.

Summarize Papers & Methodologies

Extract key findings, datasets, and comparative methods across publications.

Benchmark Rankings & Visual Analytics

Rank top research institutions, authors, funders, topics, and journals by Field-Weighted Citation Impact (FWCI) and paper volume with instant charts.

Connect Distant Disciplines

Bridge topological clusters on the map to find hidden collaborative intersections.

Genome Resource Announcement for Emerging Pathogen <i>Bipolaris gigantea</i> , Isolated from <i>Microstegium vimineum</i> — Ashish Adhikari, Brett Lane, et al. · PhytoFrontiers™ (2024) | TGRS Research Map | TGRS