Determination of platinum-resistance of women with ovarian cancer by FTIR spectroscopy combined with multivariate analyses and machine learning methods
Patients with high-grade ovarian cancer have a poor prognosis, thus effective treatment remains an unmet medical issue of high importance. Moreover, finding the reason for resistance to cisplatin is a crucial task for the improvement of anti-cancer drugs. In this study, we showed for the first time a chemical difference in a serum collected from platinum-resistance and platinum-sensitive women suffering from ovarian cancer using Fourier Transform InfraRed (FTIR) spectroscopy followed by a data analysis by Principal Component Analysis (PCA), Hierarchical Component Analysis (HCA) and 4 different machine learning algorithms. Obtained results showed a shift of PO<sup>2</sup><sup>-</sup>symmetric vibrations, amide III and amide II were observed on the FTIR spectrum of the serum collected from platinum-resistance women in comparison with the spectrum of the serum from platinum-sensitive women. Furthermore, PCA analysis clearly demonstrated the most important role of amide II and amide I in the differentiation of platinum-sensitive and platinum-resistance women. In addition, machine learning algorithms showed the important role of wavenumber at 1631 cm<sup>-1</sup>(amide I) and wavenumber at 2993 cm<sup>-1</sup> (asymmetric stretching CH<sub>3</sub> vibrations). The accuracy of the obtained results was above 92%. Summarizing, FTIR can be used in detection platinum-resistance phenomena.
Authors
- Joanna Depciuch (ORCID: https://orcid.org/0000-0003-0168-1701)
- Bartosz Klębowski (ORCID: https://orcid.org/0000-0001-7962-1894)
- J. Cebulski (ORCID: https://orcid.org/0000-0001-5657-5354)
- Ewelina Gumbarewicz (ORCID: https://orcid.org/0000-0002-5984-3059)
- Jaromir Sarzyński (ORCID: https://orcid.org/0000-0002-2133-4187)
- Tomasz Kluz (ORCID: https://orcid.org/0000-0002-4798-3986)
- Edyta Barnaś (ORCID: https://orcid.org/0000-0002-7567-3782)
- Wiesław Paja (ORCID: https://orcid.org/0000-0002-6446-036X)
- Monika Łączyńska-Madera
- Marta Kluz-Barłowska (ORCID: https://orcid.org/0000-0003-4100-4924)
- Yaroslav Shpotyuk (ORCID: https://orcid.org/0000-0001-6710-7839)
Institutions
- Medical University of Lublin (PL)
- Fryderyk Chopin University of Music (PL)
- Institute of Physics (PL)
- Institute of Computer Science (PL)
- Institute of Nuclear Physics, Polish Academy of Sciences (PL)
- Maj Institute of Pharmacology (PL)
- University of Rzeszów (PL)
Publication Details
- Journal
- Scientific Reports
- Published
- 2024-10-22
- DOI
- https://doi.org/10.1038/s41598-024-76965-y
- Citations
- 4
- Primary Topic
- Spectroscopy Techniques in Biomedical and Chemical Research
- Type
- article
- Field-Weighted Citation Impact
- 2.65