Cross-chiral exponential amplification of an RNA enzyme

An RNA ligase ribozyme that catalyzes the joining of RNA molecules of the opposite chiral handedness was optimized for the ability to synthesize its own enantiomer from two component fragments. The mirror-image D- and L-ligases operate in concert to provide a system for cross-chiral replication, whereby they catalyze each other's synthesis and undergo mutual amplification at constant temperature, with apparent exponential growth and a doubling time of about 1 h. Neither the D- nor the L-RNA components alone can achieve autocatalytic self-replication. Cross-chiral exponential amplification can be continued indefinitely through a serial-transfer process that provides an ongoing supply of the component D- and L-substrates. Unlike the familiar paradigm of semiconservative nucleic acid replication that relies on Watson-Crick pairing between complementary strands, cross-chiral replication relies on tertiary interactions between structured nucleic acids "across the mirror." There are few examples, outside of biology, of autocatalytic self-replication systems that undergo exponential amplification and there are no prior examples, in either biological or chemical systems, of cross-chiral replication enabling exponential amplification.

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Publication Details

Journal
Proceedings of the National Academy of Sciences
Published
2024-10-22
DOI
https://doi.org/10.1073/pnas.2413668121
Citations
4
Primary Topic
RNA and protein synthesis mechanisms
Type
article
Field-Weighted Citation Impact
0.94

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article

Cross-chiral exponential amplification of an RNA enzyme

Wesley G. Cochrane, Grant A. L. Bare, Gerald F. Joyce, David P. Horning
4 citations
Proceedings of the National Academy of Sciences
RNA and protein synthesis mechanisms
0.94
article

Cross-chiral exponential amplification of an RNA enzyme

Wesley G. Cochrane, Grant A. L. Bare, Gerald F. Joyce, David P. Horning
article en
4 citations

Abstract

An RNA ligase ribozyme that catalyzes the joining of RNA molecules of the opposite chiral handedness was optimized for the ability to synthesize its own enantiomer from two component fragments. The mirror-image D- and L-ligases operate in concert to provide a system for cross-chiral replication, whereby they catalyze each other's synthesis and undergo mutual amplification at constant temperature, with apparent exponential growth and a doubling time of about 1 h. Neither the D- nor the L-RNA components alone can achieve autocatalytic self-replication. Cross-chiral exponential amplification can be continued indefinitely through a serial-transfer process that provides an ongoing supply of the component D- and L-substrates. Unlike the familiar paradigm of semiconservative nucleic acid replication that relies on Watson-Crick pairing between complementary strands, cross-chiral replication relies on tertiary interactions between structured nucleic acids "across the mirror." There are few examples, outside of biology, of autocatalytic self-replication systems that undergo exponential amplification and there are no prior examples, in either biological or chemical systems, of cross-chiral replication enabling exponential amplification.

Proceedings of the National Academy of SciencesVol. 121(44)
Salk Institute for Biological Studies (US)
National Science Foundation, National Institute of General Medical Sciences
Openalex Percentile: Top 25%
RNA and protein synthesis mechanisms
0.94
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