GraphPPL.jl: A Probabilistic Programming Language for Graphical Models

This paper presents GraphPPL.jl, a novel probabilistic programming language designed for graphical models. GraphPPL.jl uniquely represents probabilistic models as factor graphs. A notable feature of GraphPPL.jl is its model nesting capability, which facilitates the creation of modular graphical models and significantly simplifies the development of large (hierarchical) graphical models. Furthermore, GraphPPL.jl offers a plugin system to incorporate inference-specific information into the graph, allowing integration with various well-known inference engines. To demonstrate this, GraphPPL.jl includes a flexible plugin to define a Constrained Bethe Free Energy minimization process, also known as variational inference. In particular, the Constrained Bethe Free Energy defined by GraphPPL.jl serves as a potential inference framework for numerous well-known inference backends, making it a versatile tool for diverse applications. This paper details the design and implementation of GraphPPL.jl, highlighting its power, expressiveness, and user-friendliness. It also emphasizes the clear separation between model definition and inference while providing developers with extensibility and customization options. This establishes GraphPPL.jl as a high-level user interface language that allows users to create complex graphical models without being burdened with the complexity of inference while allowing backend developers to easily adopt GraphPPL.jl as their frontend language.

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Publication Details

Journal
Entropy
Published
2024-10-22
DOI
https://doi.org/10.3390/e26110890
Primary Topic
Bayesian Modeling and Causal Inference
Type
article
Field-Weighted Citation Impact
0.00

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article

GraphPPL.jl: A Probabilistic Programming Language for Graphical Models

Bert de Vries, Wouter W. L. Nuijten, Dmitry V. Bagaev
Entropy
Bayesian Modeling and Causal Inference
article

GraphPPL.jl: A Probabilistic Programming Language for Graphical Models

Bert de Vries, Wouter W. L. Nuijten, Dmitry V. Bagaev
article en

Abstract

This paper presents GraphPPL.jl, a novel probabilistic programming language designed for graphical models. GraphPPL.jl uniquely represents probabilistic models as factor graphs. A notable feature of GraphPPL.jl is its model nesting capability, which facilitates the creation of modular graphical models and significantly simplifies the development of large (hierarchical) graphical models. Furthermore, GraphPPL.jl offers a plugin system to incorporate inference-specific information into the graph, allowing integration with various well-known inference engines. To demonstrate this, GraphPPL.jl includes a flexible plugin to define a Constrained Bethe Free Energy minimization process, also known as variational inference. In particular, the Constrained Bethe Free Energy defined by GraphPPL.jl serves as a potential inference framework for numerous well-known inference backends, making it a versatile tool for diverse applications. This paper details the design and implementation of GraphPPL.jl, highlighting its power, expressiveness, and user-friendliness. It also emphasizes the clear separation between model definition and inference while providing developers with extensibility and customization options. This establishes GraphPPL.jl as a high-level user interface language that allows users to create complex graphical models without being burdened with the complexity of inference while allowing backend developers to easily adopt GraphPPL.jl as their frontend language.

EntropyVol. 26(11)
Eindhoven University of Technology (NL)
Nederlandse Organisatie voor Wetenschappelijk Onderzoek, Ministerie van Economische Zaken en Klimaat
Affordable and clean energy
Openalex Percentile: Top 84%
Bayesian Modeling and Causal Inference
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GraphPPL.jl: A Probabilistic Programming Language for Graphical Models — Bert de Vries, Wouter W. L. Nuijten, et al. · Entropy (2024) | TGRS Research Map | TGRS