ContraSurv: Enhancing Prognostic Assessment of Medical Images via Data-Efficient Weakly Supervised Contrastive Learning

Prognostic assessment remains a critical challenge in medical research, often limited by the lack of well-labeled data. In this work, we introduce ContraSurv, a weakly-supervised learning framework based on contrastive learning, designed to enhance prognostic predictions in 3D medical images. ContraSurv utilizes both the self-supervised information inherent in unlabeled data and the weakly-supervised cues present in censored data, refining its capacity to extract prognostic representations. For this purpose, we establish a Vision Transformer architecture optimized for our medical image datasets and introduce novel methodologies for both self-supervised and supervised contrastive learning for prognostic assessment. Additionally, we propose a specialized supervised contrastive loss function and introduce SurvMix, a novel data augmentation technique for survival analysis. Evaluations were conducted across three cancer types and two imaging modalities on three real-world datasets. The results confirmed the enhanced performance of ContraSurv over competing methods, particularly in data with a high censoring rate.

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Publication Details

Journal
IEEE Journal of Biomedical and Health Informatics
Published
2024-10-22
DOI
https://doi.org/10.1109/jbhi.2024.3484991
Citations
6
Primary Topic
Brain Tumor Detection and Classification
Type
article
Field-Weighted Citation Impact
1.48

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article

ContraSurv: Enhancing Prognostic Assessment of Medical Images via Data-Efficient Weakly Supervised Contrastive Learning

Hailin Li, C. Y. Hu, Bingxi He, Ling‐Long Tang et al.
6 citations
IEEE Journal of Biomedical and Health Informatics
Brain Tumor Detection and Classification
1.48
article

ContraSurv: Enhancing Prognostic Assessment of Medical Images via Data-Efficient Weakly Supervised Contrastive Learning

Hailin Li, C. Y. Hu, Bingxi He, Ling‐Long Tang, Jie Tian, Hexiang Wang, Shengyuan Liu, Mengjie Fang, Di Dong, Zaiyi Liu
article en
6 citations

Abstract

Prognostic assessment remains a critical challenge in medical research, often limited by the lack of well-labeled data. In this work, we introduce ContraSurv, a weakly-supervised learning framework based on contrastive learning, designed to enhance prognostic predictions in 3D medical images. ContraSurv utilizes both the self-supervised information inherent in unlabeled data and the weakly-supervised cues present in censored data, refining its capacity to extract prognostic representations. For this purpose, we establish a Vision Transformer architecture optimized for our medical image datasets and introduce novel methodologies for both self-supervised and supervised contrastive learning for prognostic assessment. Additionally, we propose a specialized supervised contrastive loss function and introduce SurvMix, a novel data augmentation technique for survival analysis. Evaluations were conducted across three cancer types and two imaging modalities on three real-world datasets. The results confirmed the enhanced performance of ContraSurv over competing methods, particularly in data with a high censoring rate.

IEEE Journal of Biomedical and Health InformaticsVol. 29(2)
Qingdao University (CN), Sun Yat-sen University (CN), Chinese Academy of Sciences (CN), Shandong Institute of Automation (CN), Affiliated Hospital of Qingdao University (CN), Guangdong Academy of Medical Sciences (CN), Sun Yat-sen University Cancer Center (CN), Southern Medical University (CN), Beihang University (CN)
National Natural Science Foundation of China, China Postdoctoral Science Foundation, High-level Hospital Construction Project of Guangdong Provincial People's Hospital
Openalex Percentile: Top 17%
Brain Tumor Detection and Classification
1.48
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