ContraSurv: Enhancing Prognostic Assessment of Medical Images via Data-Efficient Weakly Supervised Contrastive Learning
Prognostic assessment remains a critical challenge in medical research, often limited by the lack of well-labeled data. In this work, we introduce ContraSurv, a weakly-supervised learning framework based on contrastive learning, designed to enhance prognostic predictions in 3D medical images. ContraSurv utilizes both the self-supervised information inherent in unlabeled data and the weakly-supervised cues present in censored data, refining its capacity to extract prognostic representations. For this purpose, we establish a Vision Transformer architecture optimized for our medical image datasets and introduce novel methodologies for both self-supervised and supervised contrastive learning for prognostic assessment. Additionally, we propose a specialized supervised contrastive loss function and introduce SurvMix, a novel data augmentation technique for survival analysis. Evaluations were conducted across three cancer types and two imaging modalities on three real-world datasets. The results confirmed the enhanced performance of ContraSurv over competing methods, particularly in data with a high censoring rate.
Authors
- Hailin Li (ORCID: https://orcid.org/0000-0002-5236-4178)
- C. Y. Hu (ORCID: https://orcid.org/0009-0008-7618-8122)
- Bingxi He (ORCID: https://orcid.org/0000-0003-4012-8458)
- Ling‐Long Tang (ORCID: https://orcid.org/0000-0002-8561-1454)
- Jie Tian (ORCID: https://orcid.org/0000-0003-0498-0432)
- Hexiang Wang (ORCID: https://orcid.org/0000-0002-2986-6161)
- Shengyuan Liu (ORCID: https://orcid.org/0000-0003-2317-3783)
- Mengjie Fang (ORCID: https://orcid.org/0000-0003-3027-3977)
- Di Dong
- Zaiyi Liu (ORCID: https://orcid.org/0000-0002-9307-8522)
Institutions
- Qingdao University (CN)
- Sun Yat-sen University (CN)
- Chinese Academy of Sciences (CN)
- Shandong Institute of Automation (CN)
- Affiliated Hospital of Qingdao University (CN)
- Guangdong Academy of Medical Sciences (CN)
- Sun Yat-sen University Cancer Center (CN)
- Southern Medical University (CN)
- Beihang University (CN)
Publication Details
- Journal
- IEEE Journal of Biomedical and Health Informatics
- Published
- 2024-10-22
- DOI
- https://doi.org/10.1109/jbhi.2024.3484991
- Citations
- 6
- Primary Topic
- Brain Tumor Detection and Classification
- Type
- article
- Field-Weighted Citation Impact
- 1.48
Funders
- National Natural Science Foundation of China
- China Postdoctoral Science Foundation
- High-level Hospital Construction Project of Guangdong Provincial People's Hospital