Expression‐based machine learning models for predicting plant tissue identity
Our data-driven results highlight that the assertion that knowledge from <i>Arabidopsis</i> is translatable to other plants is not always true. Considering the current landscape of abundant sequencing data, we should reevaluate the scientific emphasis on <i>Arabidopsis</i> and prioritize plant diversity.
Authors
- Alejandra Rougon‐Cardoso (ORCID: https://orcid.org/0000-0002-5273-5709)
- Sarah Percival (ORCID: https://orcid.org/0000-0003-1024-4618)
- A. López-Hernández (ORCID: https://orcid.org/0000-0001-6636-514X)
- Eddy Mendoza-Galindo (ORCID: https://orcid.org/0000-0001-7991-6270)
- Aman Y. Husbands (ORCID: https://orcid.org/0000-0003-4580-1779)
- Paulo Izquierdo (ORCID: https://orcid.org/0000-0002-2153-0655)
- Nicholas A. Johnson
- Francisco Xavier Guerra‐Castillo (ORCID: https://orcid.org/0000-0002-3346-2004)
- Wendy Leuenberger (ORCID: https://orcid.org/0000-0001-6567-9913)
- Robin Waterman (ORCID: https://orcid.org/0000-0002-5898-292X)
- Patricia Basurto‐Lozada
- Daniel H. Chitwood (ORCID: https://orcid.org/0000-0003-4875-1447)
- Elizabeth Munch (ORCID: https://orcid.org/0000-0002-9459-9493)
- Sourabh Palande (ORCID: https://orcid.org/0000-0002-1404-8238)
- MacKenzie Jacobs (ORCID: https://orcid.org/0000-0003-0113-1224)
- Arjun Krishnan (ORCID: https://orcid.org/0000-0002-7980-4110)
- Harry Shomer (ORCID: https://orcid.org/0000-0001-5081-1870)
- Beronda L. Montgomery (ORCID: https://orcid.org/0000-0003-2953-0956)
- Brandon Webster (ORCID: https://orcid.org/0000-0002-8500-7783)
- Kara C. Dobson (ORCID: https://orcid.org/0000-0001-6632-0013)
- Damián Villaseñor‐Amador (ORCID: https://orcid.org/0000-0002-6566-9069)
- Sofía Zorrilla‐Azcué (ORCID: https://orcid.org/0000-0002-5969-6685)
- Anne K. Steensma (ORCID: https://orcid.org/0000-0003-2146-9417)
- Brianna N.I. Brown (ORCID: https://orcid.org/0000-0002-2623-5583)
- María Fernanda Guerrero-Carrillo (ORCID: https://orcid.org/0000-0003-1299-3778)
- Héctor Herrera‐Orozco (ORCID: https://orcid.org/0000-0003-0211-0329)
- Asia T. Hightower (ORCID: https://orcid.org/0000-0003-2820-8754)
- Alicia Luckie‐Duque
- David Cruz Plancarte (ORCID: https://orcid.org/0000-0001-9663-6326)
- Sidney C. Sitar
- Andrew Bleich (ORCID: https://orcid.org/0000-0001-7595-4376)
- Sophia F. Buysse
- Noelle A. Connors
- Camila Martínez‐Avila (ORCID: https://orcid.org/0000-0001-7748-4080)
- Sikta Das Adhikari (ORCID: https://orcid.org/0009-0006-2433-8200)
- Robert VanBuren (ORCID: https://orcid.org/0000-0002-0407-2795)
- Madison Whyte
- Sophia Harlow
- Jeremy Arsenault
- Jenny M. Schuster
- Joanne Elise Thomson
Institutions
- Mexican Social Security Institute (MX)
- Universidad Autónoma de la Ciudad de México (MX)
- Grinnell College (US)
- Universidad de Morelia (MX)
- Instituto Tecnológico de León (MX)
- University of Colorado Anschutz Medical Campus (US)
- University of Pennsylvania (US)
- Michigan State University (US)
- Universidad Nacional Autónoma de México (MX)
Publication Details
- Journal
- Applications in Plant Sciences
- Published
- 2024-10-19
- DOI
- https://doi.org/10.1002/aps3.11621
- Citations
- 3
- Primary Topic
- Plant Molecular Biology Research
- Type
- article
- Field-Weighted Citation Impact
- 1.80
Funders
- National Science Foundation
- U.S. Department of Agriculture
- Michigan State University
- College of Engineering, Michigan State University