A chromosome-scale genome assembly of the peanut beetle, Ulomoides dermestoides (Coleptera: Tenebrionidae)

Ulomoides dermestoides, a member of the Tenebrionidae family, is known by various common names such as Chinese beetle, Chinese weevil, peanut beetle, cancer beetle, or asthma beetle. Despite its origin in Asia, it has achieved global distribution owing to its perceived medicinal properties. In this study, we employed a combination of Illumina short-read, PacBio long-read, and high-throughput chromosome conformation capture (Hi-C) sequencing technologies to produce a high-quality, chromosome-scale genome assembly of U. dermestoides. The assembled genome spans 253.38 Mb across 11 chromosomes, including the two sex chromosomes, X and Y. Key metrics include contig and scaffold N50 values of 9.83 Mb and 28.62 Mb, respectively, with an estimated genome completeness of 99.62%. Annotation efforts identified 15,553 protein-coding genes and revealed that 48.11% of the genome comprises repetitive sequences. This meticulously assembled genome serves as a pivotal resource for elucidating the genetic determinants underlying the species' ecological habits and potential medicinal properties.

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Publication Details

Journal
Scientific Data
Published
2024-10-18
DOI
https://doi.org/10.1038/s41597-024-04000-w
Citations
1
Primary Topic
Insect-Plant Interactions and Control
Type
article
Field-Weighted Citation Impact
0.54

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article

A chromosome-scale genome assembly of the peanut beetle, Ulomoides dermestoides (Coleptera: Tenebrionidae)

Chuanlin Yin, Huamei Xiao, Haiyan Gao, Sen Li et al.
1 citations
Scientific Data
Insect-Plant Interactions and Control
0.54
article

A chromosome-scale genome assembly of the peanut beetle, Ulomoides dermestoides (Coleptera: Tenebrionidae)

Chuanlin Yin, Huamei Xiao, Haiyan Gao, Sen Li, Chunhui Ma, Shaomin Tao
article en
1 citations

Abstract

Ulomoides dermestoides, a member of the Tenebrionidae family, is known by various common names such as Chinese beetle, Chinese weevil, peanut beetle, cancer beetle, or asthma beetle. Despite its origin in Asia, it has achieved global distribution owing to its perceived medicinal properties. In this study, we employed a combination of Illumina short-read, PacBio long-read, and high-throughput chromosome conformation capture (Hi-C) sequencing technologies to produce a high-quality, chromosome-scale genome assembly of U. dermestoides. The assembled genome spans 253.38 Mb across 11 chromosomes, including the two sex chromosomes, X and Y. Key metrics include contig and scaffold N50 values of 9.83 Mb and 28.62 Mb, respectively, with an estimated genome completeness of 99.62%. Annotation efforts identified 15,553 protein-coding genes and revealed that 48.11% of the genome comprises repetitive sequences. This meticulously assembled genome serves as a pivotal resource for elucidating the genetic determinants underlying the species' ecological habits and potential medicinal properties.

Scientific DataVol. 11(1)
Yichun University (CN), Zhejiang Entry-Exit Inspection and Quarantine Bureau (CN), China Jiliang University (CN)
National Science Foundation, National Natural Science Foundation of China, Zhejiang University, Hebei University
Zero hunger
Openalex Percentile: Top 28%
Insect-Plant Interactions and Control
0.54
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