Cloning and Expression Analysis of ATG8 (Autophagy-Related 8) Gene Family in Solanaceae

The autophagy-related gene family <i>ATG8</i> (Autophagy-related 8) plays an important role in plant growth, development, and stress response. In this study, 15 <i>ATG8</i> gene family sequences were amplified from Solanaceae, namely tobacco, tomato, and pepper, using RT-PCR to evaluate their basic properties, protein structure, and function, as well as the role of <i>ATG8</i> in autophagy. The physicochemical properties, the predicted secondary and tertiary protein structures, subcellular localisation, gene structures, conserved motifs, and phylogenetic relationships of the <i>ATG8</i> genes were analysed using bioinformatic techniques, and their expression patterns under sericin-induced plant disease resistance were investigated by RT-qPCR. The lengths of these proteins ranged from 79 to 120 aa, while their predicted molecular weights and isoelectric points (<i>PI</i>) ranged from 9283.62 to 13,778.74 and 6.32 to 11.44, respectively. The majority of the proteins were localised in the nucleus or chloroplasts. Conserved protein motifs and various cis-regulatory elements in the protein, with a wide range of related functions, were identified. The <i>ATG8</i> gene family members showed expression changes after treatment with osthole, which induces disease resistance in tobacco, tomato, and pepper. These findings provide a foundation for further analyses of the <i>ATG8</i> gene family in Solanaceae and the mechanism underlying the response to adverse conditions.

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Journal
Plants
Published
2024-10-18
DOI
https://doi.org/10.3390/plants13202924
Citations
1
Primary Topic
Plant Disease Resistance and Genetics
Type
article
Field-Weighted Citation Impact
0.60

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article

Cloning and Expression Analysis of ATG8 (Autophagy-Related 8) Gene Family in Solanaceae

Ya-Han Chen, Chengde Yang, Shunyi Yang, Shibo Dong et al.
1 citations
Plants
Plant Disease Resistance and Genetics
0.60
article

Cloning and Expression Analysis of ATG8 (Autophagy-Related 8) Gene Family in Solanaceae

Ya-Han Chen, Chengde Yang, Shunyi Yang, Shibo Dong, Yunfeng Lu
article en
1 citations

Abstract

The autophagy-related gene family <i>ATG8</i> (Autophagy-related 8) plays an important role in plant growth, development, and stress response. In this study, 15 <i>ATG8</i> gene family sequences were amplified from Solanaceae, namely tobacco, tomato, and pepper, using RT-PCR to evaluate their basic properties, protein structure, and function, as well as the role of <i>ATG8</i> in autophagy. The physicochemical properties, the predicted secondary and tertiary protein structures, subcellular localisation, gene structures, conserved motifs, and phylogenetic relationships of the <i>ATG8</i> genes were analysed using bioinformatic techniques, and their expression patterns under sericin-induced plant disease resistance were investigated by RT-qPCR. The lengths of these proteins ranged from 79 to 120 aa, while their predicted molecular weights and isoelectric points (<i>PI</i>) ranged from 9283.62 to 13,778.74 and 6.32 to 11.44, respectively. The majority of the proteins were localised in the nucleus or chloroplasts. Conserved protein motifs and various cis-regulatory elements in the protein, with a wide range of related functions, were identified. The <i>ATG8</i> gene family members showed expression changes after treatment with osthole, which induces disease resistance in tobacco, tomato, and pepper. These findings provide a foundation for further analyses of the <i>ATG8</i> gene family in Solanaceae and the mechanism underlying the response to adverse conditions.

PlantsVol. 13(20)
Gansu Agricultural University (CN)
National Natural Science Foundation of China, Gansu Agricultural University
Good health and well-being
Openalex Percentile: Top 21%
Plant Disease Resistance and Genetics
0.60
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