Cell Classification Based on Superpixel Segmentation and Transport-Based Morphometry

The immunohistochemistry examination is extremely important for identifying antigens in the confirmatory assessment of a patient's diagnosis and prognosis. To successfully perform this task, it is essential to identify specific cells in a given tissue sample correctly. However, carrying out this process manually by a healthcare professional is costly and can lead to errors that affect the patient's health. Thus, for analyzing immunohistochemistry medical images, this work proposes a method based on superpixel segmentation and transport-based morphometry composed by (i) superpixel generation; (ii) color filtering; (iii) cell segmentation; and (iv) transport-based classification. Experimental results show that the proposed method outperforms state-of-the-art methods in the literature for cell classification, needing only 10 positive and 10 negative cell samples to be trained.

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Published
2024-09-30
DOI
https://doi.org/10.1109/sibgrapi62404.2024.10716334
Primary Topic
Cell Image Analysis Techniques
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article
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article

Cell Classification Based on Superpixel Segmentation and Transport-Based Morphometry

Alexandre X. Falcão, Gustavo Casimiro-Lopes, Zenilton K. G. Patrocínio, Gustavo K. Rohde et al.
Cell Image Analysis Techniques
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Cell Classification Based on Superpixel Segmentation and Transport-Based Morphometry

Alexandre X. Falcão, Gustavo Casimiro-Lopes, Zenilton K. G. Patrocínio, Gustavo K. Rohde, Silvio Jamil F. Guimarães, Djalma Manoel Soares Filho, Giovanna Ribeiro Souto, Gabriel Paiva Fonseca, Giulia Barcelos Rossi de Almeida Bastos Novais
article en

Abstract

The immunohistochemistry examination is extremely important for identifying antigens in the confirmatory assessment of a patient's diagnosis and prognosis. To successfully perform this task, it is essential to identify specific cells in a given tissue sample correctly. However, carrying out this process manually by a healthcare professional is costly and can lead to errors that affect the patient's health. Thus, for analyzing immunohistochemistry medical images, this work proposes a method based on superpixel segmentation and transport-based morphometry composed by (i) superpixel generation; (ii) color filtering; (iii) cell segmentation; and (iv) transport-based classification. Experimental results show that the proposed method outperforms state-of-the-art methods in the literature for cell classification, needing only 10 positive and 10 negative cell samples to be trained.

Pontifícia Universidade Católica de Minas Gerais (BR), Universidade Estadual de Campinas (UNICAMP) (BR), University of Virginia (US)
Openalex Percentile: Top 88%
Cell Image Analysis Techniques
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