Seasonally flooded landscape connectivity and implications for fish in the Napo Moist Forest: A high-resolution mapping approach

The Amazon River Basin's fish diversity is shaped by its dynamic flood-pulse system, critical for hydrological and ecological connectivity. This study examines the Napo Moist Forest (NMF) ecoregion, mapping permanent and seasonally flooded areas from 2018 to 2021 using remote sensing and deep learning models. We aimed to map these areas at a high spatial resolution (10-m pixels) and analyse their role in maintaining lateral connectivity essential for fish diversity. Using synthetic aperture radar data from Sentinel-1 combined with deep learning algorithms, we produced high-accuracy flood maps to assess landscape connectivity between rivers and floodplains. Our methodology included creating a ground truth dataset with the Normalized Difference Water Index and integrating high-resolution optical data for model training, overcoming challenges of cloud coverage and dense vegetation. Our predictive model achieved high accuracy (mean pixel accuracy = 97 %) and consistently predicted 4801 km² of surface water, with only 3 % (130 km²) being seasonally flooded areas over four years. The Caquetá, Bajo Marañón, Napo, and Pastaza watersheds accounted for nearly 60 % of the flooded areas, highlighting their ecological importance. Connectivity analysis in three areas of interest within the NMF ecoregion revealed important seasonal and interannual fluctuations in hydrological connectivity due to changes in flooded patch characteristics. Reductions in the number and flooded patch area during low water seasons increased the distance between patches, leading to a disconnection between flooded areas, channels and rivers. Despite hydrological fluctuations, certain patches maintained consistent flooding, critical for lateral connectivity and sustaining aquatic biodiversity. These seasonally flooded areas act as connectors, influencing patch dynamics and connectivity with tributaries. Seasonal and interannual variations in hydrological connectivity are crucial for sustaining fish diversity. Conserving dynamic floodplains supports migratory fish life cycles and biodiversity. This study underscores the importance of high-resolution temporal and spatial data in conservation planning for aquatic ecosystems.