High-throughput x-ray microtomography at FaXToR: a survey towards high performance image reconstruction

With the advent of new detector technologies, on-the-fly 3D data reconstruction became an important requirement at synchrotron-based micro-tomography beamlines to follow dynamics processes inside the samples. FaXToR beamline of the Spanish synchrotron ALBA will provide a high data throughput, making use of state-of-the-art CMOS fast detectors. Therefore, particular care is required in order to cope with the computing needs. The IT infrastructure will accomplish 3D data reconstruction, distributed processing and PB-sized data storage. Herein, the infrastructure and data workflow implemented at FaXToR are described, reaching a data throughput of 7.5GB/s and an on-the-fly 3D data reconstruction and visualization of more than three volumes per second.

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Published
2024-10-18
DOI
https://doi.org/10.1117/12.3027951
Citations
1
Primary Topic
Medical Imaging Techniques and Applications
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article
Field-Weighted Citation Impact
0.40
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High-throughput x-ray microtomography at FaXToR: a survey towards high performance image reconstruction

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article

High-throughput x-ray microtomography at FaXToR: a survey towards high performance image reconstruction

Jordi Quintana, Alessandra Patera, V. Bouffetier, Gabriel Jover Mañas, Federico Cova, Steven Wohl, Pau Carnicer Heras, Nicolas Soler
article en
1 citations

Abstract

With the advent of new detector technologies, on-the-fly 3D data reconstruction became an important requirement at synchrotron-based micro-tomography beamlines to follow dynamics processes inside the samples. FaXToR beamline of the Spanish synchrotron ALBA will provide a high data throughput, making use of state-of-the-art CMOS fast detectors. Therefore, particular care is required in order to cope with the computing needs. The IT infrastructure will accomplish 3D data reconstruction, distributed processing and PB-sized data storage. Herein, the infrastructure and data workflow implemented at FaXToR are described, reaching a data throughput of 7.5GB/s and an on-the-fly 3D data reconstruction and visualization of more than three volumes per second.

ALBA Synchrotron (Spain) (ES)
Openalex Percentile: Top 34%
Medical Imaging Techniques and Applications
0.40
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