Hypergraph animals

Here we introduce simple structures for the analysis of complex hypergraphs, hypergraph animals. These structures are designed to describe the local node neighborhoods of nodes in hypergraphs. We establish their relationships to lattice animals and network motifs, and we develop their combinatorial properties for sparse and uncorrelated hypergraphs. We make use of the tight link of hypergraph animals to partition numbers, which opens up a vast mathematical framework for the analysis of hypergraph animals. We then study their abundances in random hypergraphs. Two transferable insights result from this analysis: (i) it establishes the importance of high-cardinality edges in ensembles of random hypergraphs that are inspired by the classical Erdös-Renyí random graphs; and (ii) there is a close connection between degree and hyperedge cardinality in random hypergraphs that shapes animal abundances and spectra profoundly. Both findings imply that hypergraph animals can have the potential to affect information flow and processing in complex systems. Our analysis also suggests that we need to spend more effort on investigating and developing suitable conditional ensembles of random hypergraphs that can capture real-world structures and their complex dependency structures.

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Publication Details

Journal
Physical review. E
Published
2024-10-17
DOI
https://doi.org/10.1103/physreve.110.044125
Primary Topic
Gene Regulatory Network Analysis
Type
article
Field-Weighted Citation Impact
0.00

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article

Hypergraph animals

Michael P. H. Stumpf
Physical review. E
Gene Regulatory Network Analysis
article

Hypergraph animals

Michael P. H. Stumpf
article en

Abstract

Here we introduce simple structures for the analysis of complex hypergraphs, hypergraph animals. These structures are designed to describe the local node neighborhoods of nodes in hypergraphs. We establish their relationships to lattice animals and network motifs, and we develop their combinatorial properties for sparse and uncorrelated hypergraphs. We make use of the tight link of hypergraph animals to partition numbers, which opens up a vast mathematical framework for the analysis of hypergraph animals. We then study their abundances in random hypergraphs. Two transferable insights result from this analysis: (i) it establishes the importance of high-cardinality edges in ensembles of random hypergraphs that are inspired by the classical Erdös-Renyí random graphs; and (ii) there is a close connection between degree and hyperedge cardinality in random hypergraphs that shapes animal abundances and spectra profoundly. Both findings imply that hypergraph animals can have the potential to affect information flow and processing in complex systems. Our analysis also suggests that we need to spend more effort on investigating and developing suitable conditional ensembles of random hypergraphs that can capture real-world structures and their complex dependency structures.

Physical review. EVol. 110(4)
The University of Melbourne (AU)
Australian Research Council
Sustainable cities and communities
Openalex Percentile: Top 84%
Gene Regulatory Network Analysis
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Hypergraph animals — Michael P. H. Stumpf · Physical review. E (2024) | TGRS Research Map | TGRS