Developing a predictive model to identify Sea Lamprey parasitism on Lake Trout using biologgers

Abstract Objective Sea Lamprey Petromyzon marinus remain problematic for Lake Trout Salvelinus namaycush restoration in the Laurentian Great Lakes. Fisheries assessments would benefit from knowledge of spatial–temporal patterns of Sea Lamprey parasitism on Lake Trout; however, such patterns are challenging to estimate from wounding rates on caught Lake Trout. Electronic tags have been used to identify distinct fish behaviors (e.g., foraging or spawning) using measurements of acceleration or heart rate. We hypothesized that Sea Lamprey attachment would elicit changes in the heart rate and swimming behavior of Lake Trout. Here, we determined whether tagging devices could record these changes and whether we could accurately predict lamprey attachment on Lake Trout using these recordings. Methods Adult Lake Trout (n = 34) were implanted with acceleration and heart rate tags and then were subjected to Sea Lamprey parasitism within a laboratory setting. Approximately 70 different acceleration and heart rate metrics were collected and tried as predictors of lamprey attachment. The top variables were used to train random forest models and then tried on test data sets. The accuracy of these models was then validated using a jackknife approach. Result Metrics related to body orientation and heart rate were identified as the best predictors of Sea Lamprey attachment. The best models predicted lamprey attachments with high accuracy; however, individual-level jackknife tests resulted in less accurate cross-individual prediction and regularly predicted false negatives. These findings may be related to individual variance in the Lake Trout response to attachment, but there was evidence that the shifting of tags after implantation impacted predictive performance, which could be remedied with adjustments during implantation. Conclusions Our study highlights the potential to use tagging devices for quantifying Sea Lamprey attachments on Lake Trout in the wild. Further development appears necessary; however, once improved, these predictive models have the potential to generate field-based estimates of Sea Lamprey attack rates on Lake Trout.

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Publication Details

Journal
Transactions of the American Fisheries Society
Published
2024-10-17
DOI
https://doi.org/10.1002/tafs.10491
Citations
1
Primary Topic
Fish Ecology and Management Studies
Type
article
Field-Weighted Citation Impact
0.69

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article

Developing a predictive model to identify Sea Lamprey parasitism on Lake Trout using biologgers

Steven J. Cooke, Jean V. Adams, Connor Reeve, Michael R. Lowe et al.
1 citations
Transactions of the American Fisheries Society
Fish Ecology and Management Studies
0.69
article

Developing a predictive model to identify Sea Lamprey parasitism on Lake Trout using biologgers

Steven J. Cooke, Jean V. Adams, Connor Reeve, Michael R. Lowe, Scott Miehls, Jacob W. Brownscombe, Mary L. Moser
article en
1 citations

Abstract

Abstract Objective Sea Lamprey Petromyzon marinus remain problematic for Lake Trout Salvelinus namaycush restoration in the Laurentian Great Lakes. Fisheries assessments would benefit from knowledge of spatial–temporal patterns of Sea Lamprey parasitism on Lake Trout; however, such patterns are challenging to estimate from wounding rates on caught Lake Trout. Electronic tags have been used to identify distinct fish behaviors (e.g., foraging or spawning) using measurements of acceleration or heart rate. We hypothesized that Sea Lamprey attachment would elicit changes in the heart rate and swimming behavior of Lake Trout. Here, we determined whether tagging devices could record these changes and whether we could accurately predict lamprey attachment on Lake Trout using these recordings. Methods Adult Lake Trout (n = 34) were implanted with acceleration and heart rate tags and then were subjected to Sea Lamprey parasitism within a laboratory setting. Approximately 70 different acceleration and heart rate metrics were collected and tried as predictors of lamprey attachment. The top variables were used to train random forest models and then tried on test data sets. The accuracy of these models was then validated using a jackknife approach. Result Metrics related to body orientation and heart rate were identified as the best predictors of Sea Lamprey attachment. The best models predicted lamprey attachments with high accuracy; however, individual-level jackknife tests resulted in less accurate cross-individual prediction and regularly predicted false negatives. These findings may be related to individual variance in the Lake Trout response to attachment, but there was evidence that the shifting of tags after implantation impacted predictive performance, which could be remedied with adjustments during implantation. Conclusions Our study highlights the potential to use tagging devices for quantifying Sea Lamprey attachments on Lake Trout in the wild. Further development appears necessary; however, once improved, these predictive models have the potential to generate field-based estimates of Sea Lamprey attack rates on Lake Trout.

Transactions of the American Fisheries SocietyVol. 153(6)
United States Geological Survey (US), National Oceanic and Atmospheric Administration (US), Fisheries and Oceans Canada (CA), Great Lakes Science Center (US), NOAA National Marine Fisheries Service Northwest Fisheries Science Center (US), Carleton University (CA)
Great Lakes Fishery Commission, Genome Canada, Natural Sciences and Engineering Research Council of Canada
Life below water
Openalex Percentile: Top 25%
Fish Ecology and Management Studies
0.69
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