<tt>MSIreg</tt>: an R package for unsupervised coregistration of mass spectrometry and H&E images
The R package, installation instructions, and fully reproducible vignettes describing methods and Case Studies are available open-source under the GPL-3.0 license at https://github.com/sslakkimsetty/msireg/.
Authors
- Melanie Christine Föll (ORCID: https://orcid.org/0000-0002-1887-7543)
- Kylie Ariel Bemis
- Sai Srikanth Lakkimsetty (ORCID: https://orcid.org/0000-0001-9552-1121)
- Peter Bronsert (ORCID: https://orcid.org/0000-0001-8558-0347)
- Olga Vitek A (ORCID: https://orcid.org/0000-0003-1728-1104)
- Verena Stehl (ORCID: https://orcid.org/0000-0002-7898-018X)
- Andreas Weber
Institutions
- Northeastern University (US)
- University of Freiburg (DE)
- German Cancer Research Center (DE)
- Heidelberg University (DE)
- University Medical Center Freiburg (DE)
- Düsseldorf University Hospital (DE)
- Heinrich Heine University Düsseldorf (DE)
Publication Details
- Journal
- Bioinformatics
- Published
- 2024-10-17
- DOI
- https://doi.org/10.1093/bioinformatics/btae624
- Citations
- 4
- Primary Topic
- Metabolomics and Mass Spectrometry Studies
- Type
- article
- Field-Weighted Citation Impact
- 0.94
Funders
- National Science Foundation
- Bundesministerium für Bildung und Forschung
- Albert-Ludwigs-Universität Freiburg
- National Institutes of Health
- National Institute on Aging
- Division of Biological Infrastructure