Application of machine learning algorithms for predicting the life-long physiological effects of zinc oxide Micro/Nano particles on Carum copticum

Nanoparticles impose multidimensional effects on living cells that significantly vary among different studies. Machine learning (ML) methods are recommended to elucidate more consistence and predictable relations among the affected parameters. In this study, nine ML algorithms [Support-Vector Regression (SVR), Linear, Bagging, Stochastic Gradient Descent (SGD), Gaussian Process, Random Sample Consensus (RANSAC), Partial Least Squares (PLS), Kernel Ridge, and Random Forest] were applied to evaluate their efficiency in predicting the effects of zinc oxide nanoparticles (ZnO NPs: 0.5, 1, 5, 25, and 125 µM) and microparticles (ZnO MPs: 1, 5, 25, and 125 µM) on Carum copticum. The plant root/shoot biomass; number of leaves, branches, umbellates, and flowers; protein content; reducing sugars; phenolic compounds; chlorophylls (a, b, Total); carotenoids; anthocyanins; H<sub>2</sub>O<sub>2</sub>; proline; malondialdehyde (MDA); tissue zinc content; superoxide dismutase (SOD) activity; and media ΔpH were measured and considered input variables. All levels of ZnO MPs treatments increased growth parameters compared to the control (ZnSO<sub>4</sub>). The highest shoot/root fresh and dry mass were recorded at 5 µM ZnO MPs compared with the control. The root fresh/dry mass under ZnO NPs treatments was more sensitive than shoot parameters. The number of flowers increased by 134 and 79% in MPs and NPs treatments compared to the control, respectively. ZnO NPs reduced protein content by up to 81% in 125 µM NPs compared to ZnSO<sub>4</sub>. Reducing sugar content increased to 25, 40 and 36% in 5, 25, 125 µM MPs and 67, 68, 26, 26 and 21% in 0.5, 1, 5, 25 and 125 µM NPs treatments, respectively. The pH alteration was more significant under NPs and affected zinc uptake. All levels of ZnO NPs treatments increased growth parameters compared to the control. All ML algorithms showed varied efficiencies in predicting the nonlinear relationships among parameters, with higher efficiency in predicting the behavior of root and shoot dry mass, root fresh weight and number of flowers according to R<sup>2</sup> index. The model obtained from SVR with the radial basis function (RBF) kernel was selected as a comprehensive model for predicting and determining the efficacy of the results.

Authors

Institutions

Publication Details

Journal
BMC Plant Biology
Published
2024-10-16
DOI
https://doi.org/10.1186/s12870-024-05662-9
Citations
4
Primary Topic
Medicinal Plants and Neuroprotection
Type
article
Field-Weighted Citation Impact
2.86
Controls
|||
ALL TIME
JAN
FEB
MAR
APR
MAY
JUN
JUL
AUG
SEP
OCT
article

Application of machine learning algorithms for predicting the life-long physiological effects of zinc oxide Micro/Nano particles on Carum copticum

Soleyman Dayani, Maryam Mazaheri-Tirani, Majid Iranpour Mobarakeh
4 citations
BMC Plant Biology
Medicinal Plants and Neuroprotection
2.86
article

Application of machine learning algorithms for predicting the life-long physiological effects of zinc oxide Micro/Nano particles on Carum copticum

Soleyman Dayani, Maryam Mazaheri-Tirani, Majid Iranpour Mobarakeh
article en
4 citations

Abstract

Nanoparticles impose multidimensional effects on living cells that significantly vary among different studies. Machine learning (ML) methods are recommended to elucidate more consistence and predictable relations among the affected parameters. In this study, nine ML algorithms [Support-Vector Regression (SVR), Linear, Bagging, Stochastic Gradient Descent (SGD), Gaussian Process, Random Sample Consensus (RANSAC), Partial Least Squares (PLS), Kernel Ridge, and Random Forest] were applied to evaluate their efficiency in predicting the effects of zinc oxide nanoparticles (ZnO NPs: 0.5, 1, 5, 25, and 125 µM) and microparticles (ZnO MPs: 1, 5, 25, and 125 µM) on Carum copticum. The plant root/shoot biomass; number of leaves, branches, umbellates, and flowers; protein content; reducing sugars; phenolic compounds; chlorophylls (a, b, Total); carotenoids; anthocyanins; H<sub>2</sub>O<sub>2</sub>; proline; malondialdehyde (MDA); tissue zinc content; superoxide dismutase (SOD) activity; and media ΔpH were measured and considered input variables. All levels of ZnO MPs treatments increased growth parameters compared to the control (ZnSO<sub>4</sub>). The highest shoot/root fresh and dry mass were recorded at 5 µM ZnO MPs compared with the control. The root fresh/dry mass under ZnO NPs treatments was more sensitive than shoot parameters. The number of flowers increased by 134 and 79% in MPs and NPs treatments compared to the control, respectively. ZnO NPs reduced protein content by up to 81% in 125 µM NPs compared to ZnSO<sub>4</sub>. Reducing sugar content increased to 25, 40 and 36% in 5, 25, 125 µM MPs and 67, 68, 26, 26 and 21% in 0.5, 1, 5, 25 and 125 µM NPs treatments, respectively. The pH alteration was more significant under NPs and affected zinc uptake. All levels of ZnO NPs treatments increased growth parameters compared to the control. All ML algorithms showed varied efficiencies in predicting the nonlinear relationships among parameters, with higher efficiency in predicting the behavior of root and shoot dry mass, root fresh weight and number of flowers according to R<sup>2</sup> index. The model obtained from SVR with the radial basis function (RBF) kernel was selected as a comprehensive model for predicting and determining the efficacy of the results.

BMC Plant BiologyVol. 24(1)
University of Jiroft (IR), Payame Noor University (IR), Imam Khomeini International University (IR)
Zero hunger
Openalex Percentile: Top 9%
Medicinal Plants and Neuroprotection
2.86
AI Navigator

Ask Laika to Summarize, Analyze, and Connect papers live on the map.

Summarize Papers & Methodologies

Extract key findings, datasets, and comparative methods across publications.

Benchmark Rankings & Visual Analytics

Rank top research institutions, authors, funders, topics, and journals by Field-Weighted Citation Impact (FWCI) and paper volume with instant charts.

Connect Distant Disciplines

Bridge topological clusters on the map to find hidden collaborative intersections.