Leveraging graph neural networks to predict Hammett’s constants for benzoic acid derivatives

The Hammett constants, σ m and σ p , reflect the electron-withdrawing and electron-donating abilities of substituents on aromatic compounds, and have been successfully used in various structure-activity relationship studies. However, determining these constants experimentally is both resource-intensive and time-consuming approach. In this study, we explore the use of graph neural networks (GNNs) to predict Hammett constant parameters using graph-based features. This innovative approach aims to provide rapid and efficient predictions of σ m and σ p values, eliminating the need for extensive computational and experimental setups. By leveraging the power of GNNs, we hope to streamline the process of obtaining these critical parameters, thereby facilitating more efficient reaction design and enhancing the applicability of linear free energy relationship studies in chemical research. This study employs graph neural networks (GNNs) to predict Hammett’s constants, aiming for rapid, efficient predictions without extensive experimental setups, enhancing reaction design and chemical research. • Utilization of graph-based molecular encoding derived from SMILES notations for organic molecules. • Pioneering study using a large-scale dataset to predict Hammett's constant parameters. • Dataset is publicly available, supporting reproducibility and further research. • The Attentive FP algorithm demonstrated high predictive accuracy, achieving an R² score of 0.93 on the test set. • This method offers a rapid and efficient solution for predicting Hammett's constants.

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Publication Details

Journal
Artificial Intelligence Chemistry
Published
2024-10-16
DOI
https://doi.org/10.1016/j.aichem.2024.100079
Citations
6
Primary Topic
Computational Drug Discovery Methods
Type
article
Field-Weighted Citation Impact
2.17
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article

Leveraging graph neural networks to predict Hammett’s constants for benzoic acid derivatives

Vaneet Saini, Ranjeet Kumar
6 citations
Artificial Intelligence Chemistry
Computational Drug Discovery Methods
2.17
article

Leveraging graph neural networks to predict Hammett’s constants for benzoic acid derivatives

Vaneet Saini, Ranjeet Kumar
article en
6 citations

Abstract

The Hammett constants, σ m and σ p , reflect the electron-withdrawing and electron-donating abilities of substituents on aromatic compounds, and have been successfully used in various structure-activity relationship studies. However, determining these constants experimentally is both resource-intensive and time-consuming approach. In this study, we explore the use of graph neural networks (GNNs) to predict Hammett constant parameters using graph-based features. This innovative approach aims to provide rapid and efficient predictions of σ m and σ p values, eliminating the need for extensive computational and experimental setups. By leveraging the power of GNNs, we hope to streamline the process of obtaining these critical parameters, thereby facilitating more efficient reaction design and enhancing the applicability of linear free energy relationship studies in chemical research. This study employs graph neural networks (GNNs) to predict Hammett’s constants, aiming for rapid, efficient predictions without extensive experimental setups, enhancing reaction design and chemical research. • Utilization of graph-based molecular encoding derived from SMILES notations for organic molecules. • Pioneering study using a large-scale dataset to predict Hammett's constant parameters. • Dataset is publicly available, supporting reproducibility and further research. • The Attentive FP algorithm demonstrated high predictive accuracy, achieving an R² score of 0.93 on the test set. • This method offers a rapid and efficient solution for predicting Hammett's constants.

Artificial Intelligence ChemistryVol. 2(2)
Panjab University (IN)
Openalex Percentile: Top 11%
Computational Drug Discovery Methods
2.17
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Leveraging graph neural networks to predict Hammett’s constants for benzoic acid derivatives — Vaneet Saini, Ranjeet Kumar · Artificial Intelligence Chemistry (2024) | TGRS Research Map | TGRS