The autophagy initiation factor <i>ATG13</i><scp>mRNA</scp> is stabilized by the <scp>RNA</scp>‐binding protein <scp>YBX3</scp>

Autophagy, a highly conserved form of cellular recycling, is essential for cellular homeostasis. Its dysregulation has been linked to neurodegenerative diseases and various cancers, including breast cancer. We set out to determine if the RNA-binding protein (RBP) YBX3 regulates autophagy mRNAs, as previous findings suggest YBX3 depletion reduces distinct autophagy transcripts. We found that YBX3 interacts with and stabilizes the mRNA of the autophagy initiation factor ATG13 in HeLa, which in turn increases ATG13 protein expression. We have shown that this requires the 3' untranslated region (UTR) of ATG13 and occurs in other human cell lines, including HEK293, HepG2, and HCT116. Together, our data suggest a novel regulatory role for YBX3 of autophagy initiation through posttranscriptional control of ATG13 mRNA stability.

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Publication Details

Journal
FEBS Letters
Published
2024-10-16
DOI
https://doi.org/10.1002/1873-3468.15035
Primary Topic
RNA modifications and cancer
Type
article
Field-Weighted Citation Impact
0.00

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article

The autophagy initiation factor ATG13mRNA is stabilized by the RNA‐binding protein YBX3

R. N. Ivanova, Amy Cooke, Kayla Ho, Liva Pfuhler et al.
FEBS Letters
RNA modifications and cancer
article

The autophagy initiation factor ATG13mRNA is stabilized by the RNA‐binding protein YBX3

R. N. Ivanova, Amy Cooke, Kayla Ho, Liva Pfuhler, William Skipper, Silina Awad, Jeremy Lavietes, Thomas Sah
article en

Abstract

Autophagy, a highly conserved form of cellular recycling, is essential for cellular homeostasis. Its dysregulation has been linked to neurodegenerative diseases and various cancers, including breast cancer. We set out to determine if the RNA-binding protein (RBP) YBX3 regulates autophagy mRNAs, as previous findings suggest YBX3 depletion reduces distinct autophagy transcripts. We found that YBX3 interacts with and stabilizes the mRNA of the autophagy initiation factor ATG13 in HeLa, which in turn increases ATG13 protein expression. We have shown that this requires the 3' untranslated region (UTR) of ATG13 and occurs in other human cell lines, including HEK293, HepG2, and HCT116. Together, our data suggest a novel regulatory role for YBX3 of autophagy initiation through posttranscriptional control of ATG13 mRNA stability.

FEBS LettersVol. 599(1)
Haverford College (US)
University of Wisconsin-Madison, Haverford College
Good health and well-being
Openalex Percentile: Top 84%
RNA modifications and cancer
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