Statistical batch-aware embedded integration, dimension reduction, and alignment for spatial transcriptomics
The source code implemented by R is available at https://github.com/zhanglabtools/STADIA and archived with version 1.01 on Zenodo https://zenodo.org/records/13637744.
Authors
- Shihua Zhang (ORCID: https://orcid.org/0000-0003-0192-7118)
- Yanfang Li (ORCID: https://orcid.org/0000-0003-2761-0282)
Institutions
- Chinese Academy of Sciences (CN)
- National Center for Mathematics and Interdisciplinary Sciences (CN)
- Academy of Mathematics and Systems Science (CN)
- ZheJiang Academy of Agricultural Sciences (CN)
- University of Chinese Academy of Sciences (CN)
Publication Details
- Journal
- Bioinformatics
- Published
- 2024-10-01
- DOI
- https://doi.org/10.1093/bioinformatics/btae611
- Citations
- 12
- Primary Topic
- Single-cell and spatial transcriptomics
- Type
- article
- Field-Weighted Citation Impact
- 2.81
Funders
- National Natural Science Foundation of China
- China Postdoctoral Science Foundation
- National Key Research and Development Program of China