Microsatellite density landscapes illustrate short tandem repeats aggregation in the complete reference human genome
These landscape maps exhibited that microsatellites aggregate in many genomic positions to form a large number of microsatellite density peaks with composing of mainly single motif type in the complete reference genome, indicating that the local microsatellites density varies enormously along the every chromosome of T2T-CHM13.
Authors
- Zhongyang Tan (ORCID: https://orcid.org/0000-0002-9988-7179)
- Zhuli Peng
- Hanrou Huang
- Xingxin He (ORCID: https://orcid.org/0000-0002-3790-7373)
- Yi Zhou (ORCID: https://orcid.org/0000-0002-4120-2640)
- Ruixue Shi (ORCID: https://orcid.org/0000-0002-9835-7459)
- Kazusato Ohshima (ORCID: https://orcid.org/0000-0002-8592-6042)
- Douyue Li
- Jingyu Zhou (ORCID: https://orcid.org/0000-0001-6968-914X)
- Yun Xia (ORCID: https://orcid.org/0000-0003-3136-8548)
- Yongzhuo Fu
- Zhou Lan (ORCID: https://orcid.org/0000-0001-5881-2827)
- Shiying Tang
- Weili Jiao
- Saichao Pan
- Siqian Zhou
- Xiangyan Zhao
- Wenxiang Zhang (ORCID: https://orcid.org/0000-0001-6528-7629)
- Yulin Liang
- Liang Zhang (ORCID: https://orcid.org/0000-0001-6017-1141)
- Hongxi Zhang (ORCID: https://orcid.org/0000-0003-1951-651X)
- Xiaoping Jiang (ORCID: https://orcid.org/0000-0002-5160-4037)
- Xiaolong Wu (ORCID: https://orcid.org/0009-0000-1808-2305)
- Tian You (ORCID: https://orcid.org/0000-0002-4499-126X)
- Tingyi Chen
- Shan Peng
- Junxiong Shen
- Qingjian Ouyang
Institutions
- Hunan University (CN)
- Saga University (JP)
Publication Details
- Journal
- BMC Genomics
- Published
- 2024-10-14
- DOI
- https://doi.org/10.1186/s12864-024-10843-9
- Citations
- 1
- Primary Topic
- Molecular Biology Techniques and Applications
- Type
- article
- Field-Weighted Citation Impact
- 0.23