Classification and functional analysis of disulfidptosis‐associated genes in sepsis
Sepsis represents a critical condition characterized by multiple-organ dysfunction resulting from inflammatory response to infection. Disulfidptosis is a newly identified type of programmed cell death that is intimately associated with the actin cytoskeleton collapse caused by glucose starvation and disulfide stress, but its role in sepsis is largely unknown. The study was to adopt a diagnostic and prognostic signature for sepsis with disulfidptosis based on the differentially expressed genes (DEGs) between sepsis and healthy people from GEO database. The disulfidptosis hub genes associated with sepsis were identified, and then developed consensus clustering and immune infiltration characteristics. Next, we evaluated disulfidptosis-related risk genes by using LASSO and Random Forest algorithms, and constructed the diagnostic sepsis model by nomogram. Finally, immune infiltration, GSVA analysis and mRNA-miRNA networks based on disulfidptosis-related DEGs were screened. There are five upregulated disulfidptosis-related genes and seven downregulated genes were filtered out. The six intersection disulfidptosis-related genes including LRPPRC, SLC7A11, GLUT, MYH9, NUBPL and GYS1 exhibited higher predictive ability for sepsis with an accuracy of 99.7%. In addition, the expression patterns of the critical genes were validated. The study provided a comprehensive view of disulfidptosis-based signatures to predict the prognosis, biological features and potential treatment directions for sepsis.
Authors
- Simeng He (ORCID: https://orcid.org/0000-0002-3855-8005)
- Jiaojiao Pang (ORCID: https://orcid.org/0000-0002-7253-6563)
- Yuguo Chen (ORCID: https://orcid.org/0000-0001-9501-2546)
- Qingju Zhang (ORCID: https://orcid.org/0000-0002-6225-4183)
- Yao Yu (ORCID: https://orcid.org/0000-0002-2727-1746)
- Zichen Wang (ORCID: https://orcid.org/0000-0002-9369-6611)
- Xiangxin Zhang
Institutions
- Chinese Academy of Medical Sciences & Peking Union Medical College (CN)
- Qilu Hospital of Shandong University (CN)
Publication Details
- Journal
- Journal of Cellular and Molecular Medicine
- Published
- 2024-10-01
- DOI
- https://doi.org/10.1111/jcmm.70020
- Citations
- 3
- Primary Topic
- Sepsis Diagnosis and Treatment
- Type
- article
- Field-Weighted Citation Impact
- 1.16
Funders
- National Natural Science Foundation of China
- Natural Science Foundation of Shandong Province
- National Key Research and Development Program of China