<i>Sporosarcina hypophthalmichthys</i> sp. nov. Isolated From Gastrointestinal Tract of Fish <i>Hypophthalmichthys molitrix</i> (Valenciennes, 1844)
A rod-shaped, motile, Gram-stain-positive bacterial strain RKN2<sup>T</sup>, was isolated from gut of silver carp (Hypophthalmichthys molitrix) residing in Gobindsagar reservoir, Himachal Pradesh, India. Having the greatest sequence similarity to Sporosarcina koreensis F73<sup>T</sup> (98.51%), Sporosarcina luteola Y1<sup>T</sup> (98.4%) and Sporosarcina aquimarina SW28<sup>T</sup> (98.36%), the 16S rRNA gene phylogeny confirmed the belonging of strain RKN2<sup>T</sup> to genus Sporosarcina. Digital DNA-DNA hybridization values were 21.7%, 20.6%, and 19.2%, and average nucleotide identity values were 76.42%, 80.16%, 76.51%, of strain RKN2<sup>T</sup> with Sporosarcina koreensis F73<sup>T</sup>, Sporosarcina luteola Y1<sup>T</sup>, and Sporosarcina aquimarina SW28<sup>T</sup>, respectively. The genomic analysis of strain RKN2<sup>T</sup> showed various biological properties including nitrate reduction, genes responsible for carbohydrate-active enzymes production, antimicrobial compounds, as well as potential metabolism of aromatic compounds and heavy metals. G+C composition of RKN2<sup>T</sup> genome was 52.7%. This strain can grow in temperatures between 10°C and 40°C (optimum, 28°C-30°C), NaCl concentrations up to 6.0% (w/v), and 6.0-8.0 (optimum, 6.5-7.5) pH range. MK-7 was the dominant respiratory quinone, A-4 type cell wall peptidoglycan was present with anteiso-C<sub>15:0</sub>, iso-C<sub>15: 0</sub>, and anteiso-C17:0 being the major fatty acids and Lys-Glu being main amino acids. Diphosphatidylglycerol, phosphatidylglycerol, and phosphatidylethanolamine were the strain RKN2<sup>T</sup>'s three main polar lipids. The strain is a novel species under genus Sporosarcina based on polyphasic approach and the name Sporosarcina hypophthalmichthys sp. nov. is given for strain RKN2<sup>T</sup>. RKN2<sup>T</sup> is a type strain (= MCC 4365<sup>T</sup> = JCM34522<sup>T</sup> = CCM9112<sup>T</sup>).
Authors
- Suresh Korpole (ORCID: https://orcid.org/0000-0001-5702-2380)
- Sneha Siwach (ORCID: https://orcid.org/0009-0006-7993-2282)
- Meghali Bharti
- Ram Krishan Negi (ORCID: https://orcid.org/0000-0002-5753-8376)
- Himani Khurana
- Sonakshi Modeel (ORCID: https://orcid.org/0000-0003-3666-2447)
- Stanzin Choksket
- Monika Sharma (ORCID: https://orcid.org/0000-0002-1790-6496)
Institutions
- University of Delhi (IN)
- Institute of Microbial Technology (IN)
Publication Details
- Journal
- Journal of Basic Microbiology
- Published
- 2024-10-13
- DOI
- https://doi.org/10.1002/jobm.202400226
- Citations
- 2
- Primary Topic
- Genomics and Phylogenetic Studies
- Type
- article
- Field-Weighted Citation Impact
- 0.47