Modeling Many-Body Interactions in Water with Gaussian Process Regression

We report a first-principles water dimer potential that captures many-body interactions through Gaussian process regression (GPR). Modeling is upgraded from previous work by using a custom kernel function implemented through the KeOps library, allowing for much larger GPR models to be constructed and interfaced with the next-generation machine learning force field FFLUX. A new synthetic water dimer data set, called WD24, is used for model training. The resulting models can predict 90% of dimer geometries within chemical accuracy for a test set and in a simulation. The curvature of the potential energy surface is captured by the models, and a successful geometry optimization is completed with a total energy error of just 2.6 kJ mol<sup>-1</sup>, from a starting structure where water molecules are separated by nearly 4.3 Å. Dimeric modeling of a flexible, noncrystalline system with FFLUX is shown for the first time.

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Publication Details

Journal
The Journal of Physical Chemistry A
Published
2024-10-11
DOI
https://doi.org/10.1021/acs.jpca.4c05873
Citations
3
Primary Topic
Machine Learning in Materials Science
Type
article
Field-Weighted Citation Impact
0.35

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article

Modeling Many-Body Interactions in Water with Gaussian Process Regression

Yulian T. Manchev, Paul L. A. Popelier
3 citations
The Journal of Physical Chemistry A
Machine Learning in Materials Science
0.35
article

Modeling Many-Body Interactions in Water with Gaussian Process Regression

Yulian T. Manchev, Paul L. A. Popelier
article en
3 citations

Abstract

We report a first-principles water dimer potential that captures many-body interactions through Gaussian process regression (GPR). Modeling is upgraded from previous work by using a custom kernel function implemented through the KeOps library, allowing for much larger GPR models to be constructed and interfaced with the next-generation machine learning force field FFLUX. A new synthetic water dimer data set, called WD24, is used for model training. The resulting models can predict 90% of dimer geometries within chemical accuracy for a test set and in a simulation. The curvature of the potential energy surface is captured by the models, and a successful geometry optimization is completed with a total energy error of just 2.6 kJ mol<sup>-1</sup>, from a starting structure where water molecules are separated by nearly 4.3 Å. Dimeric modeling of a flexible, noncrystalline system with FFLUX is shown for the first time.

The Journal of Physical Chemistry AVol. 128(42)
University of Manchester (GB)
Biotechnology and Biological Sciences Research Council, H2020 European Research Council
Clean water and sanitation
Openalex Percentile: Top 44%
Machine Learning in Materials Science
0.35
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