<i>Escherichia coli</i> Orf135 (NudG) mutant protein specific for oxidized dATP

Damaged 2'-deoxyribonucleotides cause mutations, cancer, cell death, and aging. The <i>Escherichia coli</i> Orf135 (NudG) protein catalyzes the hydrolysis of various 2'-deoxyribonucleotides including an oxidized form of dATP, 2-oxo-1,2-dihydro-2'-deoxyadenosine 5'-triphosphate (dA<sup>O</sup>TP, 2-hydroxy-2'-deoxyadenosine 5'-triphosphate). The best substrate is 5-methyl-2'-deoxycytidine 5'-triphosphate (dC<sup>m</sup>TP), and the protein prefers dC<sup>m</sup>TP over dA<sup>O</sup>TP by ∼200-fold in vitro. To make the enzyme specific for the mutagenic nucleotide dA<sup>O</sup>TP, a double mutant protein (E33A plus D118E) was designed and produced in <i>E. coli</i>. The purified mutant protein showed one order of magnitude higher dA<sup>O</sup>TP preference over dC<sup>m</sup>TP. The split protein based on this mutant may potentially be used to detect dA<sup>O</sup>TP in living cells.

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Publication Details

Journal
Nucleosides Nucleotides & Nucleic Acids
Published
2024-10-11
DOI
https://doi.org/10.1080/15257770.2024.2413878
Primary Topic
Enzyme Structure and Function
Type
article
Field-Weighted Citation Impact
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article

Escherichia coli Orf135 (NudG) mutant protein specific for oxidized dATP

Hiroyuki Kamiya
Nucleosides Nucleotides & Nucleic Acids
Enzyme Structure and Function
article

Escherichia coli Orf135 (NudG) mutant protein specific for oxidized dATP

Hiroyuki Kamiya
article en

Abstract

Damaged 2'-deoxyribonucleotides cause mutations, cancer, cell death, and aging. The <i>Escherichia coli</i> Orf135 (NudG) protein catalyzes the hydrolysis of various 2'-deoxyribonucleotides including an oxidized form of dATP, 2-oxo-1,2-dihydro-2'-deoxyadenosine 5'-triphosphate (dA<sup>O</sup>TP, 2-hydroxy-2'-deoxyadenosine 5'-triphosphate). The best substrate is 5-methyl-2'-deoxycytidine 5'-triphosphate (dC<sup>m</sup>TP), and the protein prefers dC<sup>m</sup>TP over dA<sup>O</sup>TP by ∼200-fold in vitro. To make the enzyme specific for the mutagenic nucleotide dA<sup>O</sup>TP, a double mutant protein (E33A plus D118E) was designed and produced in <i>E. coli</i>. The purified mutant protein showed one order of magnitude higher dA<sup>O</sup>TP preference over dC<sup>m</sup>TP. The split protein based on this mutant may potentially be used to detect dA<sup>O</sup>TP in living cells.

Nucleosides Nucleotides & Nucleic AcidsVol. 44(11)
Hiroshima University (JP)
Japan Society for the Promotion of Science
Zero hunger
Openalex Percentile: Top 89%
Enzyme Structure and Function
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<i>Escherichia coli</i> Orf135 (NudG) mutant protein specific for oxidized dATP — Hiroyuki Kamiya · Nucleosides Nucleotides & Nucleic Acids (2024) | TGRS Research Map | TGRS