Characterization of Simulated Cytoplasmic Fluids

Abstract Molecularly crowded solutions have been used to simulate cytoplasmic fluids, but little justification is provided in the literature. This work compared three key physical properties of solutions containing polyethylene glycol and sucrose against those in the cytoplasmic fluid from bacteria Escherichia coli : fluid viscosity, relaxation time (T1 and T2) of water, and the diffusion coefficient of water. It was concluded that appropriate mixtures of sucrose and polyethylene glycol 10,000, such as 10% sucrose and 15% PEG10,000 and 7.5% sucrose and 19% PEG10,000, closely mimic these properties of cytoplasmic fluid from E. coli containing around 100 mg/mL of proteins.

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Publication Details

Journal
ChemistrySelect
Published
2024-10-01
DOI
https://doi.org/10.1002/slct.202402861
Citations
2
Primary Topic
Protein Structure and Dynamics
Type
article
Field-Weighted Citation Impact
0.47

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article

Characterization of Simulated Cytoplasmic Fluids

Hongbin Yan, Razvan Simionescu, Charles Barraco, Thad A. Harroun et al.
2 citations
ChemistrySelect
Protein Structure and Dynamics
0.47
article

Characterization of Simulated Cytoplasmic Fluids

Hongbin Yan, Razvan Simionescu, Charles Barraco, Thad A. Harroun, Mariam El‐Morched
article en
2 citations

Abstract

Abstract Molecularly crowded solutions have been used to simulate cytoplasmic fluids, but little justification is provided in the literature. This work compared three key physical properties of solutions containing polyethylene glycol and sucrose against those in the cytoplasmic fluid from bacteria Escherichia coli : fluid viscosity, relaxation time (T1 and T2) of water, and the diffusion coefficient of water. It was concluded that appropriate mixtures of sucrose and polyethylene glycol 10,000, such as 10% sucrose and 15% PEG10,000 and 7.5% sucrose and 19% PEG10,000, closely mimic these properties of cytoplasmic fluid from E. coli containing around 100 mg/mL of proteins.

ChemistrySelectVol. 9(38)
Brock University (CA)
Natural Sciences and Engineering Research Council of Canada
Clean water and sanitation
Openalex Percentile: Top 35%
Protein Structure and Dynamics
0.47
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