Reproducibility and Analysis of Scientific Dataset Recommendation Methods

Datasets play a central role in scholarly communications. However, scholarly graphs are often incomplete, particularly due to the lack of connections between publications and datasets. Therefore, the importance of dataset recommendation—identifying relevant datasets for a scientific paper, an author, or a textual query—is increasing. Although various methods have been proposed for this task, their reproducibility remains unexplored, making it difficult to compare them with new approaches. We reviewed current recommendation methods for scientific datasets, focusing on the most recent and competitive approaches, including an SVM-based model, a bi-encoder retriever, a method leveraging co-authors and citation network embeddings, and a heterogeneous variational graph autoencoder. These approaches underwent a comprehensive analysis under consistent experimental conditions. Our reproducibility efforts show that three methods can be reproduced, while the graph variational autoencoder is challenging due to unavailable code and test datasets. Hence, we re-implemented this method and performed a component-based analysis to examine its strengths and limitations. Furthermore, our study indicated that three out of four considered methods produce subpar results when applied to real-world data instead of specialized datasets with ad-hoc features.

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Publication Details

Published
2024-10-08
DOI
https://doi.org/10.1145/3640457.3688071
Citations
2
Primary Topic
Advanced Graph Neural Networks
Type
article
Field-Weighted Citation Impact
0.69
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article

Reproducibility and Analysis of Scientific Dataset Recommendation Methods

Ornella Irrera, Daniele Dell’Aglio, Gianmaria Silvello, Matteo Lissandrini
2 citations
Advanced Graph Neural Networks
0.69
article

Reproducibility and Analysis of Scientific Dataset Recommendation Methods

Ornella Irrera, Daniele Dell’Aglio, Gianmaria Silvello, Matteo Lissandrini
article en
2 citations

Abstract

Datasets play a central role in scholarly communications. However, scholarly graphs are often incomplete, particularly due to the lack of connections between publications and datasets. Therefore, the importance of dataset recommendation—identifying relevant datasets for a scientific paper, an author, or a textual query—is increasing. Although various methods have been proposed for this task, their reproducibility remains unexplored, making it difficult to compare them with new approaches. We reviewed current recommendation methods for scientific datasets, focusing on the most recent and competitive approaches, including an SVM-based model, a bi-encoder retriever, a method leveraging co-authors and citation network embeddings, and a heterogeneous variational graph autoencoder. These approaches underwent a comprehensive analysis under consistent experimental conditions. Our reproducibility efforts show that three methods can be reproduced, while the graph variational autoencoder is challenging due to unavailable code and test datasets. Hence, we re-implemented this method and performed a component-based analysis to examine its strengths and limitations. Furthermore, our study indicated that three out of four considered methods produce subpar results when applied to real-world data instead of specialized datasets with ad-hoc features.

University of Verona (IT), University of Padua (IT), Aalborg University (DK)
Gender equality
Openalex Percentile: Top 24%
Advanced Graph Neural Networks
0.69
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Reproducibility and Analysis of Scientific Dataset Recommendation Methods — Ornella Irrera, Daniele Dell’Aglio, et al. · (2024) | TGRS Research Map | TGRS