Super-resolution spectral chemical imaging to study metabolic correlation in subcellular organelle

Investigating metabolic reactions within cells is crucial for unraveling the numerous biological functions. Established imaging modalities, including MRI, PET, Fluorescence, and Mass Spectrometry, present various drawbacks. To address these issues, we have developed a nonlinear multimodal imaging system. This system combines stimulated Raman scattering, multiphoton fluorescence, and second harmonic generation. It was designed to probe the spatial distribution of metabolic activities within cells and tissues by measuring multiple molecular signals. To support the analysis scheme, we have also pioneered cutting-edge algorithms, notably the Adam-based Pointillism Deconvolution (A-PoD) and Correlation Coefficient Mapping (CoCoMap). They allow us to analyze correlations between super-resolution images of nanoscale Regions of Interest. Additionally, our research has introduced a novel clustering algorithm known as Multi-SRS reference matching (Multi-SRM). This algorithm is particularly tailored to isolate signals exclusively from specific subcellular organelles. The application of this innovation offers significant potential to study aging and disease related metabolic changes.

Authors

Institutions

Publication Details

Published
2024-10-08
DOI
https://doi.org/10.1117/12.3028288
Primary Topic
Spectroscopy Techniques in Biomedical and Chemical Research
Type
article
Field-Weighted Citation Impact
0.00
Controls
|||
ALL TIME
JAN
FEB
MAR
APR
MAY
JUN
JUL
AUG
SEP
OCT
article

Super-resolution spectral chemical imaging to study metabolic correlation in subcellular organelle

Lingyan Shi, Hongje Jang, Yajuan Li, Zhi Li
Spectroscopy Techniques in Biomedical and Chemical Research
article

Super-resolution spectral chemical imaging to study metabolic correlation in subcellular organelle

Lingyan Shi, Hongje Jang, Yajuan Li, Zhi Li
article en

Abstract

Investigating metabolic reactions within cells is crucial for unraveling the numerous biological functions. Established imaging modalities, including MRI, PET, Fluorescence, and Mass Spectrometry, present various drawbacks. To address these issues, we have developed a nonlinear multimodal imaging system. This system combines stimulated Raman scattering, multiphoton fluorescence, and second harmonic generation. It was designed to probe the spatial distribution of metabolic activities within cells and tissues by measuring multiple molecular signals. To support the analysis scheme, we have also pioneered cutting-edge algorithms, notably the Adam-based Pointillism Deconvolution (A-PoD) and Correlation Coefficient Mapping (CoCoMap). They allow us to analyze correlations between super-resolution images of nanoscale Regions of Interest. Additionally, our research has introduced a novel clustering algorithm known as Multi-SRS reference matching (Multi-SRM). This algorithm is particularly tailored to isolate signals exclusively from specific subcellular organelles. The application of this innovation offers significant potential to study aging and disease related metabolic changes.

University of California San Diego (US)
Zero hunger
Openalex Percentile: Top 89%
Spectroscopy Techniques in Biomedical and Chemical Research
AI Navigator

Ask Laika to Summarize, Analyze, and Connect papers live on the map.

Summarize Papers & Methodologies

Extract key findings, datasets, and comparative methods across publications.

Benchmark Rankings & Visual Analytics

Rank top research institutions, authors, funders, topics, and journals by Field-Weighted Citation Impact (FWCI) and paper volume with instant charts.

Connect Distant Disciplines

Bridge topological clusters on the map to find hidden collaborative intersections.