Spatiotemporal Modeling of Mitochondrial Network Architecture

In many cell types, mitochondria undergo extensive fusion and fission to form dynamic, responsive network structures that contribute to a number of homeostatic, metabolic, and signaling functions. The relationship between the dynamic interactions of individual mitochondrial units and the cell-scale network architecture remains an open area of study. In this work, we use coarse-grained simulations and approximate analytic models to establish how the network morphology is governed by local mechanical and kinetic parameters. The transition between fragmented structures and extensive networks is controlled by local fusion-to-fission ratios, network density, and geometric constraints. Similar fusion rate constants are found to account for the very different structures formed by mammalian networks (poised at the percolation transition) and well-connected budding yeast networks. Over a broad parameter range, the simulated network structures can be described by effective mean-field association constants that exhibit a nonlinear dependence on the microscopic nonequilibrium fusion, fission, and transport rates. Intermediate fusion rate constants are shown to result in the highest rates of network remodeling, with mammalian mitochondrial networks situated in a regime of high turnover. This spatially resolved modeling and simulation framework helps elucidate the emergence of cellular scale network structures, and allows for the quantitative extraction of microscopic kinetic parameters from past and future experimental data. Published by the American Physical Society 2024

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Publication Details

Journal
PRX Life
Published
2024-10-08
DOI
https://doi.org/10.1103/prxlife.2.043002
Citations
9
Primary Topic
Mitochondrial Function and Pathology
Type
article
Field-Weighted Citation Impact
2.10

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article

Spatiotemporal Modeling of Mitochondrial Network Architecture

Keaton B. Holt, Suliana Manley, Elena F. Koslover, Julius Winter
9 citations
PRX Life
Mitochondrial Function and Pathology
2.10
article

Spatiotemporal Modeling of Mitochondrial Network Architecture

Keaton B. Holt, Suliana Manley, Elena F. Koslover, Julius Winter
article en
9 citations

Abstract

In many cell types, mitochondria undergo extensive fusion and fission to form dynamic, responsive network structures that contribute to a number of homeostatic, metabolic, and signaling functions. The relationship between the dynamic interactions of individual mitochondrial units and the cell-scale network architecture remains an open area of study. In this work, we use coarse-grained simulations and approximate analytic models to establish how the network morphology is governed by local mechanical and kinetic parameters. The transition between fragmented structures and extensive networks is controlled by local fusion-to-fission ratios, network density, and geometric constraints. Similar fusion rate constants are found to account for the very different structures formed by mammalian networks (poised at the percolation transition) and well-connected budding yeast networks. Over a broad parameter range, the simulated network structures can be described by effective mean-field association constants that exhibit a nonlinear dependence on the microscopic nonequilibrium fusion, fission, and transport rates. Intermediate fusion rate constants are shown to result in the highest rates of network remodeling, with mammalian mitochondrial networks situated in a regime of high turnover. This spatially resolved modeling and simulation framework helps elucidate the emergence of cellular scale network structures, and allows for the quantitative extraction of microscopic kinetic parameters from past and future experimental data. Published by the American Physical Society 2024

PRX LifeVol. 2(4)
University of California San Diego (US), École Polytechnique Fédérale de Lausanne (CH)
National Science Foundation, Chan Zuckerberg Initiative
Openalex Percentile: Top 12%
Mitochondrial Function and Pathology
2.10
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