Identification of false smut – resistant donors in Rice (Oryza sativa L.) and analysis of their morpho-molecular diversity for resistance breeding

False smut disease of rice caused by the pathogen Ustilaginoidea virens is a growing threat to the rice farmers as it affects both quality and quantity. Development of resistant variety becomes difficult, since very few resistant donors were available for false smut resistant breeding programme. Therefore, to identify potential donors for resistance breeding a total of 60 genotypes were screened at hotspot location (Gudalur) during kharif 2023 which led to identification of 12 highly resistant genotypes and the notable ones are Koolavalai, Periya chandikar, Kapikar selection and Earapalli. Genetic variability studies indicated the presence of additive gene action for all the agronomic and disease related traits. Principal component analysis revealed the first 5 principal components collectively contributing 78.79 % of the total variance with disease-related traits contributing significantly to divergence. Ten clusters were delineated using Mahalanobis D2 statistics with clusters IX and V showing higher inter cluster distance (3453.64). Forty-one polymorphic markers were used to analyse the genotypes and The Unweighted Pair Group method with Arithmetic Mean (UPGMA) clustering by Jaccard distance formed 6 clusters. The Bayesian clustering classified the entire population into 2 subpopulations. False smut linked marker RM336 and RM218 were found to be the most informative marker with high Polymorphism Information Content (0.71, 0.69) and Heterozygosity Index (0.76, 0.73). The resistant genotypes such as IG71, Thulasi vasanai sambha, Arupatham vellai, Kaltikar and Chinna aduku nel can be used in the future breeding programmes to develop the resistant cultivar and to identify the candidate genes governing resistance.

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Publication Details

Journal
Plant Science Today
Published
2024-10-07
DOI
https://doi.org/10.14719/pst.4242
Primary Topic
Rice Cultivation and Yield Improvement
Type
article
Field-Weighted Citation Impact
0.00

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article

Identification of false smut – resistant donors in Rice (Oryza sativa L.) and analysis of their morpho-molecular diversity for resistance breeding

S. Manonmani, Palanisamy Dhamotharan, M. Raveendran, Ramalingam Suresh et al.
Plant Science Today
Rice Cultivation and Yield Improvement
article

Identification of false smut – resistant donors in Rice (Oryza sativa L.) and analysis of their morpho-molecular diversity for resistance breeding

S. Manonmani, Palanisamy Dhamotharan, M. Raveendran, Ramalingam Suresh, Nallamuthu Ramya Selvi, Gopalakrishnan Chellappan, Ramasamy Saraswathi, M Sowmiya
article en

Abstract

False smut disease of rice caused by the pathogen Ustilaginoidea virens is a growing threat to the rice farmers as it affects both quality and quantity. Development of resistant variety becomes difficult, since very few resistant donors were available for false smut resistant breeding programme. Therefore, to identify potential donors for resistance breeding a total of 60 genotypes were screened at hotspot location (Gudalur) during kharif 2023 which led to identification of 12 highly resistant genotypes and the notable ones are Koolavalai, Periya chandikar, Kapikar selection and Earapalli. Genetic variability studies indicated the presence of additive gene action for all the agronomic and disease related traits. Principal component analysis revealed the first 5 principal components collectively contributing 78.79 % of the total variance with disease-related traits contributing significantly to divergence. Ten clusters were delineated using Mahalanobis D2 statistics with clusters IX and V showing higher inter cluster distance (3453.64). Forty-one polymorphic markers were used to analyse the genotypes and The Unweighted Pair Group method with Arithmetic Mean (UPGMA) clustering by Jaccard distance formed 6 clusters. The Bayesian clustering classified the entire population into 2 subpopulations. False smut linked marker RM336 and RM218 were found to be the most informative marker with high Polymorphism Information Content (0.71, 0.69) and Heterozygosity Index (0.76, 0.73). The resistant genotypes such as IG71, Thulasi vasanai sambha, Arupatham vellai, Kaltikar and Chinna aduku nel can be used in the future breeding programmes to develop the resistant cultivar and to identify the candidate genes governing resistance.

Plant Science Today
Tamil Nadu Agricultural University (IN)
Indian Council of Agricultural Research
Life in Land
Openalex Percentile: Top 90%
Rice Cultivation and Yield Improvement
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