Genome-Wide Profiling of the ACTIN Gene Family and Its Implications for Agronomic Traits in Brassica napus: A Bioinformatics Study

ACTINs are key structural proteins in plants, which form the actin cytoskeleton and are engaged in numerous routine cellular processes. Meanwhile, <i>ACTIN</i>, recognized as a housekeeping gene, has not yet been thoroughly investigated in <i>Brassica napus</i>. The current research has led to the detection of 69 actin genes in <i>B. napus</i>, which were organized into six distinct subfamilies on the basis of phylogenetic relationships. Functional enrichment analysis, along with the construction of protein interaction networks, suggested that <i>BnACTIN</i>s play roles in Preserving cell morphology and facilitating cytoplasmic movement, plant development, and adaptive responses to environmental stress. Moreover, the <i>BnACTIN</i> genes presented a wide range of expression levels among different tissues, whereas the majority experienced a substantial increase in expression when subjected to various abiotic stresses, demonstrating a pronounced sensitivity to abiotic factors. Furthermore, association mapping analysis indicated that some <i>BnACTIN</i>s potentially affected certain key agronomic traits. Overall, our research deepens the knowledge of <i>BnACTIN</i> genes, promotes the cultivation of improved <i>B. napus</i> strains, and lays the groundwork for subsequent functional research.

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Publication Details

Journal
International Journal of Molecular Sciences
Published
2024-10-06
DOI
https://doi.org/10.3390/ijms251910752
Citations
1
Primary Topic
Plant Reproductive Biology
Type
article
Field-Weighted Citation Impact
0.23

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article

Genome-Wide Profiling of the ACTIN Gene Family and Its Implications for Agronomic Traits in Brassica napus: A Bioinformatics Study

Shengli Yao, Xiu‐Ju Zhao, Qing Zhou, Jiayu Peng et al.
1 citations
International Journal of Molecular Sciences
Plant Reproductive Biology
0.23
article

Genome-Wide Profiling of the ACTIN Gene Family and Its Implications for Agronomic Traits in Brassica napus: A Bioinformatics Study

Shengli Yao, Xiu‐Ju Zhao, Qing Zhou, Jiayu Peng, Ming Hu
article en
1 citations

Abstract

ACTINs are key structural proteins in plants, which form the actin cytoskeleton and are engaged in numerous routine cellular processes. Meanwhile, <i>ACTIN</i>, recognized as a housekeeping gene, has not yet been thoroughly investigated in <i>Brassica napus</i>. The current research has led to the detection of 69 actin genes in <i>B. napus</i>, which were organized into six distinct subfamilies on the basis of phylogenetic relationships. Functional enrichment analysis, along with the construction of protein interaction networks, suggested that <i>BnACTIN</i>s play roles in Preserving cell morphology and facilitating cytoplasmic movement, plant development, and adaptive responses to environmental stress. Moreover, the <i>BnACTIN</i> genes presented a wide range of expression levels among different tissues, whereas the majority experienced a substantial increase in expression when subjected to various abiotic stresses, demonstrating a pronounced sensitivity to abiotic factors. Furthermore, association mapping analysis indicated that some <i>BnACTIN</i>s potentially affected certain key agronomic traits. Overall, our research deepens the knowledge of <i>BnACTIN</i> genes, promotes the cultivation of improved <i>B. napus</i> strains, and lays the groundwork for subsequent functional research.

International Journal of Molecular SciencesVol. 25(19)
South China Agricultural University (CN), Wuhan Polytechnic University (CN)
National Natural Science Foundation of China, Wuhan Polytechnic University
Zero hunger
Openalex Percentile: Top 42%
Plant Reproductive Biology
0.23
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