Knockdown of SlYTHDF2 Accelerates Dark–Induced Tomato Leaf Senescence by Affecting the ABA Pathway

N6-methyladenosine (m<sup>6</sup>A) is a widespread post-transcriptional modification in eukaryotic mRNAs. Proteins with the YTH structural domain act as m<sup>6</sup>A-binding proteins by recognizing the m<sup>6</sup>A modification and regulating mRNA through this recognition. In this study, <i>SlYTHDF2</i>, a prototypical m<sup>6</sup>A -binding protein gene in the YTH family was expressed in various tissues, and subcellular localization analyses indicated that the SlYTHDF2 protein was localized in the nucleus and cytoplasm. <i>SlYTHDF2</i> knockout lines were obtained using CRISPR/Cas9 technology and showed the senesced leaves prematurely increased endogenous ABA accumulation compared with the wild type. Moreover, we found that dark promoted leaf senescence in <i>SlYTHDF2</i> knockout lines and exogenous ABA further accelerated leaf senescence under dark conditions. The qRT-PCR analysis revealed significant alterations in the expression of genes associated with the ABA pathway. Relative to the wild type, the <i>CR-slythdf2</i> plants exhibited reduced levels of photosynthetic pigments, higher accumulation of reactive oxygen species, and increased damage to cell membranes. Additionally, we discovered that SlYTHDF2 interacts with the chloroplast-binding protein SlRBCS3 through yeast two-hybrid and BiFC experiments. Overall, our data suggest the important role of <i>SlYTHDF2</i> in regulating tomato leaf senescence.

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Publication Details

Journal
Plants
Published
2024-10-06
DOI
https://doi.org/10.3390/plants13192800
Citations
5
Primary Topic
RNA modifications and cancer
Type
article
Field-Weighted Citation Impact
1.17

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article

Knockdown of SlYTHDF2 Accelerates Dark–Induced Tomato Leaf Senescence by Affecting the ABA Pathway

Zihan Gao, Qiaoli Xie, Guoping Chen, Xinru Chen et al.
5 citations
Plants
RNA modifications and cancer
1.17
article

Knockdown of SlYTHDF2 Accelerates Dark–Induced Tomato Leaf Senescence by Affecting the ABA Pathway

Zihan Gao, Qiaoli Xie, Guoping Chen, Xinru Chen, Zongli Hu, Yangyang Li, Xiaoqian Nie
article en
5 citations

Abstract

N6-methyladenosine (m<sup>6</sup>A) is a widespread post-transcriptional modification in eukaryotic mRNAs. Proteins with the YTH structural domain act as m<sup>6</sup>A-binding proteins by recognizing the m<sup>6</sup>A modification and regulating mRNA through this recognition. In this study, <i>SlYTHDF2</i>, a prototypical m<sup>6</sup>A -binding protein gene in the YTH family was expressed in various tissues, and subcellular localization analyses indicated that the SlYTHDF2 protein was localized in the nucleus and cytoplasm. <i>SlYTHDF2</i> knockout lines were obtained using CRISPR/Cas9 technology and showed the senesced leaves prematurely increased endogenous ABA accumulation compared with the wild type. Moreover, we found that dark promoted leaf senescence in <i>SlYTHDF2</i> knockout lines and exogenous ABA further accelerated leaf senescence under dark conditions. The qRT-PCR analysis revealed significant alterations in the expression of genes associated with the ABA pathway. Relative to the wild type, the <i>CR-slythdf2</i> plants exhibited reduced levels of photosynthetic pigments, higher accumulation of reactive oxygen species, and increased damage to cell membranes. Additionally, we discovered that SlYTHDF2 interacts with the chloroplast-binding protein SlRBCS3 through yeast two-hybrid and BiFC experiments. Overall, our data suggest the important role of <i>SlYTHDF2</i> in regulating tomato leaf senescence.

PlantsVol. 13(19)
Chongqing University (CN)
National Natural Science Foundation of China
Life in Land
Openalex Percentile: Top 22%
RNA modifications and cancer
1.17
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