Very-Large-Scale GPU-Accelerated Nuclear Gradient of Time-Dependent Density Functional Theory with Tamm–Dancoff Approximation and Range-Separated Hybrid Functionals
Modern graphics processing units (GPUs) provide an unprecedented level of computing power. In this study, we present a high-performance, multi-GPU implementation of the analytical nuclear gradient for Kohn-Sham time-dependent density functional theory (TDDFT), employing the Tamm-Dancoff approximation (TDA) and Gaussian-type atomic orbitals as basis functions. We discuss GPU-efficient algorithms for the derivatives of electron repulsion integrals and exchange-correlation functionals within the range-separated scheme. As an illustrative example, we calculate the TDA-TDDFT gradient of the S<sub>1</sub> state of a full-scale green fluorescent protein with explicit water solvent molecules, totaling 4353 atoms, at the ωB97X/def2-SVP level of theory. Our algorithm demonstrates favorable parallel efficiencies on a high-speed distributed system equipped with 256 Nvidia A100 GPUs, achieving >70% with up to 64 GPUs and 31% with 256 GPUs, effectively leveraging the capabilities of modern high-performance computing systems.
Authors
- Young Min Rhee (ORCID: https://orcid.org/0000-0002-2392-3962)
- Dae Sin Kim
- Inkook Jang
- Troy Van Voorhis
- Jinkyu Yim
- Won‐Joon Son (ORCID: https://orcid.org/0000-0003-4087-4661)
- Inkoo Kim (ORCID: https://orcid.org/0000-0002-1653-0992)
- Yeonchoo Cho (ORCID: https://orcid.org/0000-0002-8578-2608)
- Alexandra Alexiu (ORCID: https://orcid.org/0000-0003-3477-4824)
- Seungmin Lee (ORCID: https://orcid.org/0000-0003-2965-1205)
- Sungmin Kim (ORCID: https://orcid.org/0000-0003-3548-7368)
- Hyung‐Jin Kim
- Daun Jeong (ORCID: https://orcid.org/0000-0002-3084-3477)
- Leah P. Weisburn
Institutions
- Korea Advanced Institute of Science and Technology (KR)
- Samsung (South Korea) (KR)
- Massachusetts Institute of Technology (US)
Publication Details
- Journal
- Journal of Chemical Theory and Computation
- Published
- 2024-10-07
- DOI
- https://doi.org/10.1021/acs.jctc.4c01003
- Citations
- 7
- Primary Topic
- Advanced NMR Techniques and Applications
- Type
- article
- Field-Weighted Citation Impact
- 1.69
Funders
- Samsung