Geographical distribution and molecular identification of cyst nematodes in Bajaur, Pakistan

Summary A survey conducted along the Panjkora river in Bajaur, Khyber Pakhtunkhwa (KPK), Pakistan, identified seven isolates of nematode populations belonging to the Heteroderidae family among the 25 soil and root samples examined. Within these isolates, three were classified as Heterodera avenae , H. filipjevi and H. zeae , while the remaining four were identified as Globodera pallida . The identification of these cyst nematodes involved a combination of morphological and morphometric analyses, complemented by molecular techniques employing newly designed primers to amplify diagnostic regions from any cyst nematode. This study marks the first molecular characterisation of H. avenae , H. zeae and G. pallida in Pakistan and the initial report of H. filipjevi in the country. The mapping of crop-growing regions with sampling points highlights areas at high risk for further pathogen spread.

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Publication Details

Journal
Nematology
Published
2024-10-04
DOI
https://doi.org/10.1163/15685411-bja10354
Primary Topic
Nematode management and characterization studies
Type
article
Field-Weighted Citation Impact
0.00

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Geographical distribution and molecular identification of cyst nematodes in Bajaur, Pakistan

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Nematode management and characterization studies
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Geographical distribution and molecular identification of cyst nematodes in Bajaur, Pakistan

Tabassum Ara Khanum, Jamie Orr, James A. Price, Sami Ullah, Salma Javed
article en

Abstract

Summary A survey conducted along the Panjkora river in Bajaur, Khyber Pakhtunkhwa (KPK), Pakistan, identified seven isolates of nematode populations belonging to the Heteroderidae family among the 25 soil and root samples examined. Within these isolates, three were classified as Heterodera avenae , H. filipjevi and H. zeae , while the remaining four were identified as Globodera pallida . The identification of these cyst nematodes involved a combination of morphological and morphometric analyses, complemented by molecular techniques employing newly designed primers to amplify diagnostic regions from any cyst nematode. This study marks the first molecular characterisation of H. avenae , H. zeae and G. pallida in Pakistan and the initial report of H. filipjevi in the country. The mapping of crop-growing regions with sampling points highlights areas at high risk for further pathogen spread.

NematologyVol. 26(9)
James Hutton Institute (GB), University of St Andrews (GB), University of Karachi (PK), Institute of Molecular and Cell Biology (RU)
Rural and Environment Science and Analytical Services Division
Life in Land
Openalex Percentile: Top 90%
Nematode management and characterization studies
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