3D reconstruction and morphological characterisation of single wheat grains by X-ray μCT

Abstract The intricate task of achieving three-dimensional (3D) visual reconstruction of wheat kernels represents a notable challenge within the domain of digital grain analysis, playing a pivotal role in the realms of grain storage, processing, and breeding. However, existing investigations focused on individual kernels predominantly encompass dimensions such as length, width, height, and epidermal texture features, with a tendency to be invasive to the internal organisational structure of the kernel. Non-local mean filtering algorithm is proposed to segment various tissues, and the 2D grey scale images are extracted from X-ray micro-computed tomography (μCT) to reconstruct a meticulous 3D visualisation model of individual wheat grains. Furthermore, building upon this foundation, an exhaustive assessment of morphological and structural parameters pertaining to each facet of the internal organisation of the wheat seed grain is conducted. Notably, these calculated parameters align with data generated by prior researchers，with 80% of the volume of the endosperm, 12% of the pericarp, about 2% of the endosperm and scutellum, and 4% of the pores. The established parameters and resultant 3D visual models serve as foundational components for subsequent in-depth examinations into various physicochemical properties, including quality characteristics, heat, and mass transfer attributes, as well as variations in its morphological structure during breeding, which are pertinent to individual grains. This research contributes valuable insights and methodologies that can propel the advancement of studies in wheat kernel analysis.