Imino chemical shift assignments of tRNAAsp, tRNAVal and tRNAPhe from Escherichia coli

Transfer RNAs (tRNAs) are an essential component of the protein synthesis machinery. In order to accomplish their cellular functions, tRNAs go through a highly controlled biogenesis process leading to the production of correctly folded tRNAs. tRNAs in solution adopt the characteristic L-shape form, a stable tertiary conformation imperative for the cellular stability of tRNAs, their thermotolerance, their interaction with protein and RNA complexes and their activity in the translation process. The introduction of post-transcriptional modifications by modification enzymes, the global conformation of tRNAs, and their cellular stability are highly interconnected. We aim to further investigate this existing link by monitoring the maturation of bacterial tRNAs in E. coli extracts using NMR. Here, we report on the <sup>1</sup>H, <sup>15</sup>N chemical shift assignment of the imino groups and some amino groups of unmodified and modified E. coli tRNA<sup>Asp</sup>, tRNA<sup>Val</sup> and tRNA<sup>Phe</sup>, which are essential for characterizing their maturation process using NMR spectroscopy.

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Publication Details

Journal
Biomolecular NMR Assignments
Published
2024-10-04
DOI
https://doi.org/10.1007/s12104-024-10207-0
Citations
1
Primary Topic
RNA modifications and cancer
Type
article
Field-Weighted Citation Impact
0.23

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article

Imino chemical shift assignments of tRNAAsp, tRNAVal and tRNAPhe from Escherichia coli

Carine Chagneau, Pierre Barraud, Marcel-Joseph Yared
1 citations
Biomolecular NMR Assignments
RNA modifications and cancer
0.23
article

Imino chemical shift assignments of tRNAAsp, tRNAVal and tRNAPhe from Escherichia coli

Carine Chagneau, Pierre Barraud, Marcel-Joseph Yared
article en
1 citations

Abstract

Transfer RNAs (tRNAs) are an essential component of the protein synthesis machinery. In order to accomplish their cellular functions, tRNAs go through a highly controlled biogenesis process leading to the production of correctly folded tRNAs. tRNAs in solution adopt the characteristic L-shape form, a stable tertiary conformation imperative for the cellular stability of tRNAs, their thermotolerance, their interaction with protein and RNA complexes and their activity in the translation process. The introduction of post-transcriptional modifications by modification enzymes, the global conformation of tRNAs, and their cellular stability are highly interconnected. We aim to further investigate this existing link by monitoring the maturation of bacterial tRNAs in E. coli extracts using NMR. Here, we report on the <sup>1</sup>H, <sup>15</sup>N chemical shift assignment of the imino groups and some amino groups of unmodified and modified E. coli tRNA<sup>Asp</sup>, tRNA<sup>Val</sup> and tRNA<sup>Phe</sup>, which are essential for characterizing their maturation process using NMR spectroscopy.

Biomolecular NMR AssignmentsVol. 18(2)
Centre National de la Recherche Scientifique (FR), Université Paris Cité (FR), Institut de Biologie Physico-Chimique (FR), Expression Génétique Microbienne (FR)
Agence Nationale de la Recherche
Openalex Percentile: Top 42%
RNA modifications and cancer
0.23
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Imino chemical shift assignments of tRNAAsp, tRNAVal and tRNAPhe from Escherichia coli — Carine Chagneau, Pierre Barraud, et al. · Biomolecular NMR Assignments (2024) | TGRS Research Map | TGRS