G6PD Potenza: A Novel Pathogenic Variant Broadening the Mutational Landscape in the Italian Population

<b>Background:</b> Glucose 6 phosphate dehydrogenase (<i>G6PD)</i> is a rate-limiting enzyme of the pentose phosphate pathway. The loss of <i>G6PD</i> activity in red blood cells increases the risk of acute haemolytic anaemia under oxidative stress induced by infections, some medications, or fava beans. More than 200 single missense mutations are known in the <i>G6PD</i> gene. A 41-year-old woman with a family history of favism coming from the Basilicata region (Italy) was evaluated at our hospital for <i>G6PD</i> abnormalities. <b>Methods:</b> DNA was extracted from a peripheral blood sample and genotyped for the most common <i>G6PD</i> pathogenic variants (PVs). Positive results obtained by Restriction Fragment Length Polymorphism (<i>RFLP</i>), as per practice in our laboratory, were then reconfirmed in Sanger sequencing. <b>Results:</b><i>RFLP</i> analysis highlighted a variant compatible with the <i>G6PD Cassano</i> variant. Confirmatory testing by Sanger unexpectedly identified a novel variant: c.1357G>A, p.(Val453Met) (NM_001360016.2); the same variant was found in the patient's mother. In silico models predicted a deleterious effect of this variant at the protein level. The novel <i>G6PD</i> variant was named "<i>G6PD Potenza</i>" on the basis of the patient's regional origin. <b>Conclusions:</b> This case describes a novel <i>G6PD</i> variant. It also highlights how the Sanger sequencing technique still represents an indispensable confirmatory standard method for variants that could be misinterpreted by only using a "first-level" approach, such as the <i>RFLP</i>. We stress that the evaluation of clinical manifestations in G6PD-deficient patients is of primary importance for the classification of each new <i>G6PD</i> mutation, in agreement with the new WHO guidelines.

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Publication Details

Journal
Genes
Published
2024-10-04
DOI
https://doi.org/10.3390/genes15101298
Primary Topic
Neonatal Health and Biochemistry
Type
article
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article

G6PD Potenza: A Novel Pathogenic Variant Broadening the Mutational Landscape in the Italian Population

Elisa De Paolis, Claudio Ricciardi Tenore, Alessia Perrucci, Martina Rinelli et al.
Genes
Neonatal Health and Biochemistry
article

G6PD Potenza: A Novel Pathogenic Variant Broadening the Mutational Landscape in the Italian Population

Elisa De Paolis, Claudio Ricciardi Tenore, Alessia Perrucci, Martina Rinelli, Roberto Bertozzi, Francesca Brisighelli, Andrea Urbani, Angelo Minucci, Jessica Evangelista, Giulia Maneri, Maria De Bonis, Eugenia Tulli, Claudia Calò
article en

Abstract

<b>Background:</b> Glucose 6 phosphate dehydrogenase (<i>G6PD)</i> is a rate-limiting enzyme of the pentose phosphate pathway. The loss of <i>G6PD</i> activity in red blood cells increases the risk of acute haemolytic anaemia under oxidative stress induced by infections, some medications, or fava beans. More than 200 single missense mutations are known in the <i>G6PD</i> gene. A 41-year-old woman with a family history of favism coming from the Basilicata region (Italy) was evaluated at our hospital for <i>G6PD</i> abnormalities. <b>Methods:</b> DNA was extracted from a peripheral blood sample and genotyped for the most common <i>G6PD</i> pathogenic variants (PVs). Positive results obtained by Restriction Fragment Length Polymorphism (<i>RFLP</i>), as per practice in our laboratory, were then reconfirmed in Sanger sequencing. <b>Results:</b><i>RFLP</i> analysis highlighted a variant compatible with the <i>G6PD Cassano</i> variant. Confirmatory testing by Sanger unexpectedly identified a novel variant: c.1357G>A, p.(Val453Met) (NM_001360016.2); the same variant was found in the patient's mother. In silico models predicted a deleterious effect of this variant at the protein level. The novel <i>G6PD</i> variant was named "<i>G6PD Potenza</i>" on the basis of the patient's regional origin. <b>Conclusions:</b> This case describes a novel <i>G6PD</i> variant. It also highlights how the Sanger sequencing technique still represents an indispensable confirmatory standard method for variants that could be misinterpreted by only using a "first-level" approach, such as the <i>RFLP</i>. We stress that the evaluation of clinical manifestations in G6PD-deficient patients is of primary importance for the classification of each new <i>G6PD</i> mutation, in agreement with the new WHO guidelines.

GenesVol. 15(10)
Università Cattolica del Sacro Cuore (IT), Agostino Gemelli University Polyclinic (IT)
Good health and well-being
Openalex Percentile: Top 73%
Neonatal Health and Biochemistry
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