Inhibitory Potential of Silychrystin on ERR‐γ, Keap‐1, and NF‐κB Proteins in Acute Pancreatitis Explored Through Molecular Docking and Molecular Dynamics Simulation

Abstract Acute pancreatitis (AP) presents a substantial burden in India, characterized by evolving disease patterns and life‐threatening complications. Globally, the increasing incidence of AP underscores the urgent need for effective therapeutic interventions. Key proteins such as ERR‐γ, Keap‐1, and NF‐κB play pivotal roles in the pathophysiology of AP, contributing to dysregulated molecular pathways and cellular interactions. Targeting these proteins offers a promising avenue to modulate these dysregulated pathways and improve AP outcomes. Smilax perfoliata , widely recognized for its diverse medicinal properties, presents a promising opportunity for the exploration of novel antipancreatitis agents, although data on its efficacy remains limited. In this study, we employed molecular docking simulations to evaluate the binding interactions between 23 identified phytocompounds from Smilax perfoliata and the target proteins ERR‐γ, Keap‐1, and NF‐κB. Among the compounds tested, silychrystin exhibited the highest binding affinity with Keap‐1 (−11.2 kcal/mol), followed by ERR‐γ (−10.2 kcal/mol) and NF‐κB (−8.5 kcal/mol). Additionally, a 200‐ns molecular dynamics simulation using GROMACS (GROningen MAchine for Chemical Simulations) confirmed the stability of the silychrystin‐target protein complex, revealing consistent interaction stability and minimal structural fluctuations. These findings suggest that silychrystin could serve as a promising therapeutic candidate for AP, warranting further research to evaluate its efficacy in preclinical and clinical settings.

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Journal
ChemistrySelect
Published
2024-10-02
DOI
https://doi.org/10.1002/slct.202404305
Primary Topic
Alkaline Phosphatase Research Studies
Type
article
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article

Inhibitory Potential of Silychrystin on ERR‐γ, Keap‐1, and NF‐κB Proteins in Acute Pancreatitis Explored Through Molecular Docking and Molecular Dynamics Simulation

Tridip J. Das, Pallabi Kalita Hui, Kunal Bhattacharya, Satyendra Deka et al.
ChemistrySelect
Alkaline Phosphatase Research Studies
article

Inhibitory Potential of Silychrystin on ERR‐γ, Keap‐1, and NF‐κB Proteins in Acute Pancreatitis Explored Through Molecular Docking and Molecular Dynamics Simulation

Tridip J. Das, Pallabi Kalita Hui, Kunal Bhattacharya, Satyendra Deka, Upasa Gowala, Hui Tag, Shaurya Tiwari, Tanzim Nishad Ullah
article en

Abstract

Abstract Acute pancreatitis (AP) presents a substantial burden in India, characterized by evolving disease patterns and life‐threatening complications. Globally, the increasing incidence of AP underscores the urgent need for effective therapeutic interventions. Key proteins such as ERR‐γ, Keap‐1, and NF‐κB play pivotal roles in the pathophysiology of AP, contributing to dysregulated molecular pathways and cellular interactions. Targeting these proteins offers a promising avenue to modulate these dysregulated pathways and improve AP outcomes. Smilax perfoliata , widely recognized for its diverse medicinal properties, presents a promising opportunity for the exploration of novel antipancreatitis agents, although data on its efficacy remains limited. In this study, we employed molecular docking simulations to evaluate the binding interactions between 23 identified phytocompounds from Smilax perfoliata and the target proteins ERR‐γ, Keap‐1, and NF‐κB. Among the compounds tested, silychrystin exhibited the highest binding affinity with Keap‐1 (−11.2 kcal/mol), followed by ERR‐γ (−10.2 kcal/mol) and NF‐κB (−8.5 kcal/mol). Additionally, a 200‐ns molecular dynamics simulation using GROMACS (GROningen MAchine for Chemical Simulations) confirmed the stability of the silychrystin‐target protein complex, revealing consistent interaction stability and minimal structural fluctuations. These findings suggest that silychrystin could serve as a promising therapeutic candidate for AP, warranting further research to evaluate its efficacy in preclinical and clinical settings.

ChemistrySelectVol. 9(37)
Rajiv Gandhi University (IN), National Institute of Pharmaceutical Education and Research (IN), Pratiksha Institute of Pharmaceutical Sciences, National Institute of Technology Arunachal Pradesh (IN)
Openalex Percentile: Top 73%
Alkaline Phosphatase Research Studies
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