Chromosome genome assembly and annotation of Adzuki Bean (Vigna angularis)
Adzuki bean (Vigna angularis) is a significant dietary legume crop that is prevalent in East Asia. It also holds traditional medicinal importance in China. In this study, we report a high-quality, chromosome-level genome assembly of adzuki bean obtained by employing Illumina short-read sequencing, PacBio long-read sequencing, and Hi-C technology. The assembly spans 447.8 Mb, encompassing 96.32% of the estimated genome, with contig and scaffold N50 values of 16.5 and 41.0 Mb, respectively. More than 98.2% of the 1,614 BUSCO genes were fully identified, and 25,939 genes were annotated, with 98.23% of them being functionally identifiable. Vigna angularis was estimated to diverge successively from Vigna unguiculata and Vigna radiata about 15.3 and 8.7 million years ago (Ma), respectively. This chromosome-level reference genome of Vigna angularis provides a robust foundation for exploring the functional genomics and genome evolution of adzuki bean, thereby facilitating advancements in molecular breeding of adzuki bean.
Authors
- Wan Li (ORCID: https://orcid.org/0009-0003-8996-2205)
- Zhiquan Yang (ORCID: https://orcid.org/0000-0001-6283-0753)
- Hongtao Xiang
- Fanglei He
- Xiaoqing Zhang (ORCID: https://orcid.org/0000-0003-0177-4406)
- Xueyang Wang (ORCID: https://orcid.org/0000-0002-7745-5615)
- Chao Fang
- Qi Liu (ORCID: https://orcid.org/0009-0002-0475-3424)
Institutions
- Yunnan Agricultural University (CN)
- Guangzhou University (CN)
- Suihua University (CN)
- Heilongjiang Provincial Academy of Agricultural Sciences (CN)
Publication Details
- Journal
- Scientific Data
- Published
- 2024-10-02
- DOI
- https://doi.org/10.1038/s41597-024-03911-y
- Citations
- 3
- Primary Topic
- Agricultural pest management studies
- Type
- article
- Field-Weighted Citation Impact
- 1.80
Funders
- National Natural Science Foundation of China