Gene expression of Decompression Sickness-resistant rats through a miRnome/transcriptome crossed approach

Susceptibility to decompression sickness (DCS) is characterized by a wide inter-individual variability, the origins of which are still poorly understood. We selectively bred rats with at least a 3-fold greater resistance to DCS than standard rats after 6 generations. In order to better understand DCS mechanisms, we compared the static genome expression of these resistant rats from the 10<sup>th</sup> generation to their counterparts of the initial non-resistant Wistar strain, by a microarray transcriptomic approach coupled and crossed with a PCR plates miRnome study. Thus, we identified differentially expressed genes on selected males and females, as well as gender differences in those genes, and we crossed these transcripts with the respective targets of the differentially expressed microRNAs. Our results highlight pathways involved in inflammatory responses, circadian clock, cell signaling and motricity, phagocytosis or apoptosis, and they confirm the importance of inflammation in DCS pathophysiology.

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Publication Details

Journal
Communications Biology
Published
2024-10-02
DOI
https://doi.org/10.1038/s42003-024-06963-3
Primary Topic
RNA Research and Splicing
Type
article
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article

Gene expression of Decompression Sickness-resistant rats through a miRnome/transcriptome crossed approach

Emmanuel Dugrenot, François Guerrero, Anthony Guernec, Jérémy Orsat
Communications Biology
RNA Research and Splicing
article

Gene expression of Decompression Sickness-resistant rats through a miRnome/transcriptome crossed approach

Emmanuel Dugrenot, François Guerrero, Anthony Guernec, Jérémy Orsat
article en

Abstract

Susceptibility to decompression sickness (DCS) is characterized by a wide inter-individual variability, the origins of which are still poorly understood. We selectively bred rats with at least a 3-fold greater resistance to DCS than standard rats after 6 generations. In order to better understand DCS mechanisms, we compared the static genome expression of these resistant rats from the 10<sup>th</sup> generation to their counterparts of the initial non-resistant Wistar strain, by a microarray transcriptomic approach coupled and crossed with a PCR plates miRnome study. Thus, we identified differentially expressed genes on selected males and females, as well as gender differences in those genes, and we crossed these transcripts with the respective targets of the differentially expressed microRNAs. Our results highlight pathways involved in inflammatory responses, circadian clock, cell signaling and motricity, phagocytosis or apoptosis, and they confirm the importance of inflammation in DCS pathophysiology.

Communications BiologyVol. 7(1)
University of North Carolina at Chapel Hill (US), North Carolina State University (US), Université de Bretagne Occidentale (FR), Institut Supérieur de l'Électronique et du Numérique (FR), Library Network (US), Laboratoire des Sciences et Techniques de l’Information de la Communication et de la Connaissance (FR)
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Openalex Percentile: Top 85%
RNA Research and Splicing
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