Automated Neural Architecture Search for Cardiac Amyloidosis Classification from [18F]-Florbetaben PET Images

Medical image classification using convolutional neural networks (CNNs) is promising but often requires extensive manual tuning for optimal model definition. Neural architecture search (NAS) automates this process, reducing human intervention significantly. This study applies NAS to [18F]-Florbetaben PET cardiac images for classifying cardiac amyloidosis (CA) sub-types (amyloid light chain (AL) and transthyretin amyloid (ATTR)) and controls. Following data preprocessing and augmentation, an evolutionary cell-based NAS approach with a fixed network macro-structure is employed, automatically deriving cells' micro-structure. The algorithm is executed five times, evaluating 100 mutating architectures per run on an augmented dataset of 4048 images (originally 597), totaling 5000 architectures evaluated. The best network (NAS-Net) achieves 76.95% overall accuracy. K-fold analysis yields mean ± SD percentages of sensitivity, specificity, and accuracy on the test dataset: AL subjects (98.7 ± 2.9, 99.3 ± 1.1, 99.7 ± 0.7), ATTR-CA subjects (93.3 ± 7.8, 78.0 ± 2.9, 70.9 ± 3.7), and controls (35.8 ± 14.6, 77.1 ± 2.0, 96.7 ± 4.4). NAS-derived network performance rivals manually determined networks in the literature while using fewer parameters, validating its automatic approach's efficacy.

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Publication Details

Journal
Journal of Imaging Informatics in Medicine
Published
2024-10-02
DOI
https://doi.org/10.1007/s10278-024-01275-8
Citations
2
Primary Topic
Amyloidosis: Diagnosis, Treatment, Outcomes
Type
article
Field-Weighted Citation Impact
0.47

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article

Automated Neural Architecture Search for Cardiac Amyloidosis Classification from [18F]-Florbetaben PET Images

Assuero Giorgetti, Giuseppe Vergaro, Michele Scipioni, Dario Genovesi et al.
2 citations
Journal of Imaging Informatics in Medicine
Amyloidosis: Diagnosis, Treatment, Outcomes
0.47
article

Automated Neural Architecture Search for Cardiac Amyloidosis Classification from [18F]-Florbetaben PET Images

Assuero Giorgetti, Giuseppe Vergaro, Michele Scipioni, Dario Genovesi, Maria Filomena Santarelli, Michele Emdin, Brunella Favilli, Lisa Anita De Santi, Vincenzo Positano, Filippo Bargagna, Donato Zigrino
article en
2 citations

Abstract

Medical image classification using convolutional neural networks (CNNs) is promising but often requires extensive manual tuning for optimal model definition. Neural architecture search (NAS) automates this process, reducing human intervention significantly. This study applies NAS to [18F]-Florbetaben PET cardiac images for classifying cardiac amyloidosis (CA) sub-types (amyloid light chain (AL) and transthyretin amyloid (ATTR)) and controls. Following data preprocessing and augmentation, an evolutionary cell-based NAS approach with a fixed network macro-structure is employed, automatically deriving cells' micro-structure. The algorithm is executed five times, evaluating 100 mutating architectures per run on an augmented dataset of 4048 images (originally 597), totaling 5000 architectures evaluated. The best network (NAS-Net) achieves 76.95% overall accuracy. K-fold analysis yields mean ± SD percentages of sensitivity, specificity, and accuracy on the test dataset: AL subjects (98.7 ± 2.9, 99.3 ± 1.1, 99.7 ± 0.7), ATTR-CA subjects (93.3 ± 7.8, 78.0 ± 2.9, 70.9 ± 3.7), and controls (35.8 ± 14.6, 77.1 ± 2.0, 96.7 ± 4.4). NAS-derived network performance rivals manually determined networks in the literature while using fewer parameters, validating its automatic approach's efficacy.

Journal of Imaging Informatics in MedicineVol. 38(3)
University of Pisa (IT), Harvard University (US), Scuola Superiore Sant'Anna (IT), Massachusetts General Hospital (US), Athinoula A. Martinos Center for Biomedical Imaging (US), Ospedale San Giuseppe (IT), Fondazione Toscana Gabriele Monasterio (IT), Czech Academy of Sciences, Institute of Physiology (CZ)
Università di Pisa
Openalex Percentile: Top 35%
Amyloidosis: Diagnosis, Treatment, Outcomes
0.47
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