Calibrating tumor growth and invasion parameters with spectral spatial analysis of cancer biopsy tissues
The reaction-diffusion equation is widely used in mathematical models of cancer. The calibration of model parameters based on limited clinical data is critical to using reaction-diffusion equation simulations for reliable predictions on a per-patient basis. Here, we focus on cell-level data as routinely available from tissue biopsies used for clinical cancer diagnosis. We analyze the spatial architecture in biopsy tissues stained with multiplex immunofluorescence. We derive a two-point correlation function and the corresponding spatial power spectral distribution. We show that this data-deduced power spectral distribution can fit the power spectrum of the solution of reaction-diffusion equations that can then identify patient-specific tumor growth and invasion rates. This approach allows the measurement of patient-specific critical tumor dynamical properties from routinely available biopsy material at a single snapshot in time.
Authors
- S. Pasetto (ORCID: https://orcid.org/0000-0002-4926-3704)
- Heiko Enderling (ORCID: https://orcid.org/0000-0002-9696-6410)
- Pirmin Schlicke (ORCID: https://orcid.org/0000-0001-9619-728X)
- Robert A. Gatenby (ORCID: https://orcid.org/0000-0002-1621-1510)
- Marilin Rosa (ORCID: https://orcid.org/0000-0003-3247-6137)
- Mohammad U. Zahid (ORCID: https://orcid.org/0000-0003-4893-4462)
- Roberto Díaz (ORCID: https://orcid.org/0000-0003-1371-3264)
- Michael E. Montejo
Institutions
- The University of Texas MD Anderson Cancer Center (US)
- Moffitt Cancer Center (US)
Publication Details
- Journal
- npj Systems Biology and Applications
- Published
- 2024-10-02
- DOI
- https://doi.org/10.1038/s41540-024-00439-0
- Citations
- 4
- Primary Topic
- Mathematical Biology Tumor Growth
- Type
- article
- Field-Weighted Citation Impact
- 1.58
Funders
- Moffitt Cancer Center
- Jayne Koskinas Ted Giovanis Foundation for Health and Policy
- National Institutes of Health
- National Cancer Institute