Microbial Metabolomics’ Latest SICRIT: Soft Ionization by Chemical Reaction In-Transfer Mass Spectrometry

Microbial metabolomics studies are a common approach for identifying microbial strains that have a capacity to produce new chemistries both <i>in vitro</i> and <i>in situ</i>. A limitation to applying microbial metabolomics to the discovery of new chemical entities is the rediscovery of known compounds, or "known unknowns." One factor contributing to this rediscovery is that the majority of laboratories use one ionization source─electrospray ionization (ESI)─to conduct metabolomics studies. Although ESI is an efficient, widely adopted ionization method, its widespread use may contribute to the reidentification of known metabolites. Here, we present the use of a dielectric barrier discharge ionization (DBDI) for microbial metabolomics applications through the use of soft ionization chemical reaction in-transfer (SICRIT). Additionally, we compared SICRIT to ESI using two different <i>Vibrio</i> species: <i>Vibrio fischeri</i>, a symbiotic marine bacterium, and <i>Vibrio cholerae</i>, a pathogenic bacterium. Overall, we found that the SICRIT source ionizes a different set of metabolites than ESI, and it has the ability to ionize lipids more efficiently than ESI in the positive mode. This work highlights the value of using more than one ionization source for the detection of metabolites.

Authors

Institutions

Publication Details

Journal
Journal of the American Society for Mass Spectrometry
Published
2024-09-30
DOI
https://doi.org/10.1021/jasms.4c00309
Citations
3
Primary Topic
Metabolomics and Mass Spectrometry Studies
Type
article
Field-Weighted Citation Impact
0.70

Funders

Controls
|||
ALL TIME
JAN
FEB
MAR
APR
MAY
JUN
JUL
AUG
SEP
OCT
article

Microbial Metabolomics’ Latest SICRIT: Soft Ionization by Chemical Reaction In-Transfer Mass Spectrometry

Mark J. Mandel, Denise A. Ludvik, Fitnat H. Yildiz, Laura M. Sanchez et al.
3 citations
Journal of the American Society for Mass Spectrometry
Metabolomics and Mass Spectrometry Studies
0.70
article

Microbial Metabolomics’ Latest SICRIT: Soft Ionization by Chemical Reaction In-Transfer Mass Spectrometry

Mark J. Mandel, Denise A. Ludvik, Fitnat H. Yildiz, Laura M. Sanchez, Taylor Hayward, Allison Ferranti, Allyson McAtamney
article en
3 citations

Abstract

Microbial metabolomics studies are a common approach for identifying microbial strains that have a capacity to produce new chemistries both <i>in vitro</i> and <i>in situ</i>. A limitation to applying microbial metabolomics to the discovery of new chemical entities is the rediscovery of known compounds, or "known unknowns." One factor contributing to this rediscovery is that the majority of laboratories use one ionization source─electrospray ionization (ESI)─to conduct metabolomics studies. Although ESI is an efficient, widely adopted ionization method, its widespread use may contribute to the reidentification of known metabolites. Here, we present the use of a dielectric barrier discharge ionization (DBDI) for microbial metabolomics applications through the use of soft ionization chemical reaction in-transfer (SICRIT). Additionally, we compared SICRIT to ESI using two different <i>Vibrio</i> species: <i>Vibrio fischeri</i>, a symbiotic marine bacterium, and <i>Vibrio cholerae</i>, a pathogenic bacterium. Overall, we found that the SICRIT source ionizes a different set of metabolites than ESI, and it has the ability to ionize lipids more efficiently than ESI in the positive mode. This work highlights the value of using more than one ionization source for the detection of metabolites.

Journal of the American Society for Mass SpectrometryVol. 35(12)
University of Wisconsin–Madison (US), University of California, Santa Cruz (US)
National Science Foundation, University of California, Santa Cruz, National Institutes of Health, National Institute of General Medical Sciences, National Institute of Allergy and Infectious Diseases, Division of Integrative Organismal Systems
Openalex Percentile: Top 29%
Metabolomics and Mass Spectrometry Studies
0.70
AI Navigator

Ask Laika to Summarize, Analyze, and Connect papers live on the map.

Summarize Papers & Methodologies

Extract key findings, datasets, and comparative methods across publications.

Benchmark Rankings & Visual Analytics

Rank top research institutions, authors, funders, topics, and journals by Field-Weighted Citation Impact (FWCI) and paper volume with instant charts.

Connect Distant Disciplines

Bridge topological clusters on the map to find hidden collaborative intersections.